Protein Info for SMa1037 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 488 signal peptide" amino acids 1 to 26 (26 residues), see Phobius details PF02321: OEP" amino acids 78 to 255 (178 residues), 30.8 bits, see alignment E=1.3e-11 amino acids 284 to 460 (177 residues), 48.8 bits, see alignment E=3.7e-17

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SMa1037)

Predicted SEED Role

"Copper tolerance protein" in subsystem Copper homeostasis

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92ZC8 at UniProt or InterPro

Protein Sequence (488 amino acids)

>SMa1037 hypothetical protein (Sinorhizobium meliloti 1021)
MMRATVKRAAALALPLVLGGGCVSASEYAAKNAGFSSVEAKTAEAVGKQTVWIQSQQHAR
VVSDRVKTLMAKKAIDVETAVQVALLNNKGLQAAYADLGDSAADAWQSTMLVNPTVSVGL
TGIGTPGLEAFKSVEGMIANNILALATRDRNIAIADTGFRRAQLNAALRTLQLASDTRRA
WINAVAAWETVAQLNQAQAAADAASELAQELGKSGALTKEGQAREHVFSAELAGQTAKAR
LEARLAKEELTRLMGLWGSGIDYQVPNRLPQLPKGIMKRDLIEAEALQRRVDLQMAKLDL
EATAKSYKLTEATRYVTDLELLTGFETERELEEGDIKRETTGQAELEFVIPIFDSGRARM
RKAELAYMRAANLLAEKAVNVRSEARSAYQAYRANYDIARHYRNSVVPLRTKIEEESLLT
YNAMITNTFELLADSREKVNANLLAVNAKRDFWLAEANLAPAIYGGGAGAAAGETEVAAA
AEGGGGGH