Protein Info for SMa0447 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 373 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 33 to 52 (20 residues), see Phobius details amino acids 63 to 85 (23 residues), see Phobius details amino acids 153 to 179 (27 residues), see Phobius details amino acids 203 to 226 (24 residues), see Phobius details amino acids 231 to 254 (24 residues), see Phobius details amino acids 266 to 270 (5 residues), see Phobius details amino acids 274 to 292 (19 residues), see Phobius details amino acids 309 to 336 (28 residues), see Phobius details PF01594: AI-2E_transport" amino acids 21 to 345 (325 residues), 145.7 bits, see alignment E=1e-46

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SMa0447)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q930G3 at UniProt or InterPro

Protein Sequence (373 amino acids)

>SMa0447 hypothetical protein (Sinorhizobium meliloti 1021)
MSMVTQGKLIGQLLAFGALGLLAIGCTLVLWPFLSAILWAAVICFSTWPAYRLFERAVGG
YRALAAAAMTVLVVVVIVAPLALLATTLADNISSLVAGVTHVLEQGPPAPPDWVRGLPIA
GEGLATYWEGLAHNAPAFTIELKKVIGPFADVALIGGTLFGAGLLELALSIFIGFFLFLH
GRRMTALTRQIAERVAGARARRLLSVVGVTVTGVVYGLIGTALAQGLLAGVGFWIAGVPQ
ALLLGCLTFVLSFVPAGPPFVWGPVALWLFMQESVWWGIFVAIWGLLLVSSIDNFLRPYL
LGRNTNLPVLLGLFGLIGGVLAFGLIGLFLGPTLLAVAHSLFREWIAAELEERRQPPSSS
TGRDQRSGPRQGG