Protein Info for SMa0279 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 203 PF13489: Methyltransf_23" amino acids 19 to 147 (129 residues), 42.9 bits, see alignment E=1.3e-14 PF13649: Methyltransf_25" amino acids 37 to 128 (92 residues), 59.4 bits, see alignment E=1.4e-19 PF08241: Methyltransf_11" amino acids 38 to 132 (95 residues), 74.2 bits, see alignment E=3.3e-24 PF08242: Methyltransf_12" amino acids 38 to 130 (93 residues), 40.2 bits, see alignment E=1.4e-13 PF13847: Methyltransf_31" amino acids 56 to 136 (81 residues), 34.4 bits, see alignment E=5.3e-12 PF01209: Ubie_methyltran" amino acids 77 to 135 (59 residues), 39 bits, see alignment E=1.8e-13

Best Hits

KEGG orthology group: None (inferred from 99% identity to smk:Sinme_5345)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q930P6 at UniProt or InterPro

Protein Sequence (203 amino acids)

>SMa0279 hypothetical protein (Sinorhizobium meliloti 1021)
MGIYRDVILPRLCDLSMRNERLRPYRERVIGAAQGRVLEIGVGSGLNLPFYGPVVGEVLA
LEPSAGLVAMAREAPRSDLPVSFIDASAEAIPLDDKSVDTVVTTWTLCTIPDAAAALTEM
RRVLRPGGKLLFVEHGLAPDRGVRWWQDTLTPVWRRISGGCHLNRPIRSMIECGGFRMER
VETGYMQGPKPMTFMYEGSARPE