Protein Info for SM_b21241 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 430 transmembrane" amino acids 23 to 44 (22 residues), see Phobius details amino acids 50 to 70 (21 residues), see Phobius details amino acids 82 to 102 (21 residues), see Phobius details amino acids 108 to 127 (20 residues), see Phobius details amino acids 138 to 160 (23 residues), see Phobius details amino acids 184 to 201 (18 residues), see Phobius details amino acids 208 to 224 (17 residues), see Phobius details amino acids 230 to 246 (17 residues), see Phobius details amino acids 251 to 269 (19 residues), see Phobius details amino acids 343 to 370 (28 residues), see Phobius details amino acids 378 to 395 (18 residues), see Phobius details amino acids 401 to 421 (21 residues), see Phobius details PF04932: Wzy_C" amino acids 214 to 356 (143 residues), 43 bits, see alignment E=2.1e-15

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SM_b21241)

Predicted SEED Role

"FIG01074089: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92VG0 at UniProt or InterPro

Protein Sequence (430 amino acids)

>SM_b21241 hypothetical protein (Sinorhizobium meliloti 1021)
MSETGMTTAHQLRFASQPSRTNLRLAAIERAVVYLAVFLAPYATLRFSELFFTFSDFFFC
LSLFLLLITGRIRSRPLEQTTSIWLCAFTLLFIGIMLGSLFHGSPQRGLIVMGQYLFAYL
ILMVILIREDPREAYRLAGIFLVSVILIDIHGIITFYTVGYVPGEGKGVVTGGKRLATVL
RNPNLAAAINALTLPILLFFWSSGRVKSYLALPALVIVIVTVVLTSSNSGLFSTALCLAV
FIAMISTPRLLLRLALGAGIVVGGAALFGNKEMLPKTFQTRVLGALSSGDISEAGTFLSR
AALMEEAAHIISEEQIRLVGLGADQFRERSVQSAPVHNIYLLLWVEGGLLALVGWLMFSG
VGMLLALAILKVGGDKRALAAVVTTILVFLVIALFNPHMYARYWTMPILLCFGLGLTQLR
GAGSTKVQIS