Protein Info for SM_b21168 in Sinorhizobium meliloti 1021

Annotation: integral membrane transporter protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 394 transmembrane" amino acids 7 to 29 (23 residues), see Phobius details amino acids 42 to 63 (22 residues), see Phobius details amino acids 70 to 89 (20 residues), see Phobius details amino acids 95 to 119 (25 residues), see Phobius details amino acids 127 to 154 (28 residues), see Phobius details amino acids 160 to 178 (19 residues), see Phobius details amino acids 199 to 223 (25 residues), see Phobius details amino acids 235 to 255 (21 residues), see Phobius details amino acids 267 to 288 (22 residues), see Phobius details amino acids 294 to 313 (20 residues), see Phobius details amino acids 327 to 350 (24 residues), see Phobius details amino acids 362 to 381 (20 residues), see Phobius details PF07690: MFS_1" amino acids 8 to 346 (339 residues), 146.4 bits, see alignment E=5.3e-47

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SM_b21168)

Predicted SEED Role

"FIG01075034: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92V77 at UniProt or InterPro

Protein Sequence (394 amino acids)

>SM_b21168 integral membrane transporter protein (Sinorhizobium meliloti 1021)
MDKRIIWLAVGSFTMSTVGFVFSSLLPSIAADTHTTIPRSGHLITLFSLSYAIGAPLLSA
LAGAADRRRLLVTAMLVFVVGNCIAAMSVSFTTLLLAQIVMGMASGLFAATAQAAAVSLA
GPEHRALAISIVVGGTTFAVALGAPLGALIAAFWGWRGTFGAVALLGLTCAAVLWLRLPR
GLSGTKLTMSERFGAIGRPGVASSLMVTFLYLTGGFMIISYLAPLAIDGAGLSQLALPGL
LLAFGVGAVIGNLSSGYLADRLGATRVVTASLISALAVSLMIAFGLHFLTRDLAGLLLIG
IMVPWGIVGWAFPPAQASRIVGFAPEVAHLTLSLNASAIYLGIATGTAIGGRVLENTAAA
DLGFFAALFPVASLAVLYAGLRSHRRRLATAAAE