Protein Info for SM_b21055 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 194 TIGR01444: methyltransferase, FkbM family" amino acids 69 to 173 (105 residues), 67 bits, see alignment E=1.2e-22 PF05050: Methyltransf_21" amino acids 71 to 173 (103 residues), 29.9 bits, see alignment E=2.9e-11

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SM_b21055)

Predicted SEED Role

"methyltransferase, FkbM family domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92VR5 at UniProt or InterPro

Protein Sequence (194 amino acids)

>SM_b21055 hypothetical protein (Sinorhizobium meliloti 1021)
MICRRTENGPMRLVSRLLDAFSERRVVATGEAAGLTLVSRDADPEFGRGTYERPIQQAIA
SNLAPGDAFFDIGANIGFFSIIAARRVGTEGQVYAFEPVPRNAAAIRRTAQLNGFHAIRV
FPEAVGATIGRAELLLARHIGGAALASAEAPPDMNGYLEVDVTTLDDAIARHACGPRRWS
RSTSKVPRSKSFVA