Protein Info for SM_b20961 in Sinorhizobium meliloti 1021

Annotation: protein tyrosine kinase MPA1 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 786 transmembrane" amino acids 43 to 63 (21 residues), see Phobius details amino acids 461 to 481 (21 residues), see Phobius details TIGR01005: exopolysaccharide transport protein family" amino acids 25 to 786 (762 residues), 1227 bits, see alignment E=0 PF02706: Wzz" amino acids 28 to 118 (91 residues), 66 bits, see alignment E=6.2e-22 PF13807: GNVR" amino acids 409 to 479 (71 residues), 35.2 bits, see alignment E=1.9e-12 TIGR01007: capsular exopolysaccharide family" amino acids 566 to 754 (189 residues), 118 bits, see alignment E=4.1e-38 PF13614: AAA_31" amino acids 576 to 696 (121 residues), 27.6 bits, see alignment E=5.5e-10 PF01656: CbiA" amino acids 578 to 753 (176 residues), 30.5 bits, see alignment E=6.5e-11

Best Hits

Swiss-Prot: 100% identical to EXOP_RHIME: Succinoglycan biosynthesis transport protein ExoP (exoP) from Rhizobium meliloti (strain 1021)

KEGG orthology group: None (inferred from 100% identity to sme:SM_b20961)

MetaCyc: 100% identical to succinoglycan biosynthesis transport protein ExoP (Sinorhizobium meliloti 1021)
2.4.99.-

Predicted SEED Role

No annotation

MetaCyc Pathways

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See P33698 at UniProt or InterPro

Protein Sequence (786 amino acids)

>SM_b20961 protein tyrosine kinase MPA1 family protein (Sinorhizobium meliloti 1021)
MNRTAPMKQRSVPLSSIMPSEEQSDGFIDLDRLVAAVFRRARLVAAFVVLFIALGAAYLL
FATPYYTSMTQILLDENLSKYAEEEPTPVNSQMLDTQIASAVEILKSGELALRVVDKLKL
SENDTILNPPRSPVDMVKEWLKTATGLFSGGPDVTEEAARNGRRQKAAAIIQQSLAVERV
SRSSVVAVAFRSSDPLLAATIARGYASAYLTDQLNANFEATERASVWLQERLTDLQQRSQ
AAALEVAHFRAENGLTAARGELMSEQQMADLNSQLIVAQADTASASARYDQYKSIVDQGP
ENAVKNATISSKEGDNSVIRDLRTRYLTVGKREREVSDNFGADHPQAVSLRAEQEDVARQ
IYQELQQLTASYKNEYEVAQSREESLRKSIQGIAGKTSDASEQLVQLRELEQKAAALKTL
YESYLGRYEQATQQQSFPIAKARVISEAGVPVSPSSPKKTMTLALSAVLGMMVGGAYAAF
LEFRERTFRLEGNIRSILGHRSLGYVPLLGTRMKKKAQLVHAHFGSVKRHDEAVDDTMPF
QRLSRIVVDAPRSTFAETFRNAKLACDQMLAGSESRVIAIASALPDEGKSIIAANFAALL
AASGKRTLLIDADIRKPGLTQMITPAPRTGLVETLIGEASWPAGIKVDQRTKLAILPAGG
ASHQRHQSNELLASPAMANLIENARNAFDYVVVDLAALAPVVDAKAFAPLADGILFVVEW
GRTPSRLVRDLLHSEPLINSKVLGVILNKTDMNELGKYSDFDGAEKYRHRYGKYYVENTI
TENTAA