Protein Info for SM_b20824 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 778 PF10111: Glyco_tranf_2_2" amino acids 47 to 333 (287 residues), 431.8 bits, see alignment E=1.2e-133 PF05159: Capsule_synth" amino acids 457 to 621 (165 residues), 46.6 bits, see alignment E=3.4e-16

Best Hits

KEGG orthology group: None (inferred from 100% identity to sme:SM_b20824)

Predicted SEED Role

"Predicted glycosyltransferase involved in capsule biosynthesis"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92VY3 at UniProt or InterPro

Protein Sequence (778 amino acids)

>SM_b20824 hypothetical protein (Sinorhizobium meliloti 1021)
MLHAQPNGEELPVAETEELAKVKSVLTDSRQFSRTSAVDVVTPSDITMVICLRAHEGNHW
VMDRLRLIRSYYDPMPRVLVLDFGSPEPFASEISTICALNGLDYSHEPDTDTYSPAAAHN
RGFEKCETDLVFFCDADCFGSSDMFAKMASIATSLKMRTIIDTPLVLPVYHLNQADTQVF
FDVEDMTCRSRFLDAMAFYSPLAEFRKEDNFFIAPYSNIFLINRRMFSLTGGYDERFRGH
GSEDFEFLTRLGLYIKNLPMPVELTKDHLGPLREGFFSSRPYSGFRRFLEALSKPAENLG
LRVFHLYHERSKSEDWGSQNDWKRERMNEAFKVYVGSEHNLLQVDFLAREKTVVCLCKHL
DQWGYYTPLRAAGYRLHPVFDTAPETIAAITTGLISGEFSALSIFNPYMKSHAQFKQLVL
LARDLGREVIVIERGALPGTIYYDEDVAYNSPNFSEERFLQEQFSDDELADSRSYIEELK
AGDSTLEQMDDYATTRRKLAALASLKSPVLFIPLQLHDDMAVTMFIKGEQQYPEFSASLS
ETIDANPDIVFVVKPHPLSKLDHLTQKPNLILAAREDNIHCLLDIASFTVCYNSGVGLLS
ILHQTPTATLGNAFYNMAGAGYRASSVQDAIDVFRAGNLTPPPSELIERLAAWFIFRRYS
RFVATDSIAEFKERKAHGYKDILVTHFRWNGHDLPLDRQRRFVQFSRRSYAWSQMAVTVK
GTTKHSHSSFYEWAFLITVPATMPPPPKTSRKRSNGNAQGQIYYGMPRKLTGVTAIEI