Protein Info for SM_b20670 in Sinorhizobium meliloti 1021

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 425 PF07005: SBD_N" amino acids 5 to 229 (225 residues), 237.4 bits, see alignment E=1.8e-74 PF17042: NBD_C" amino acids 259 to 417 (159 residues), 149.7 bits, see alignment E=1.2e-47

Best Hits

Swiss-Prot: 66% identical to OTNK_METRJ: 3-oxo-tetronate kinase (otnK) from Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831 / NBRC 15690 / NCIMB 10815 / 0-1)

KEGG orthology group: None (inferred from 100% identity to sme:SM_b20670)

Predicted SEED Role

"FIG00641944: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q92TW7 at UniProt or InterPro

Protein Sequence (425 amino acids)

>SM_b20670 hypothetical protein (Sinorhizobium meliloti 1021)
MTILLGSIADDYTGASDLANTLTKNGLRTVQTVGIPDPSLALPDVDAVVVSLKIRSVAAK
DAVAAALEAESWLRGRGAGHVLYKICSTFDSTDLGNIGPVTEALLSVSGGHIALVTPAFP
ETGRTVYLGHLFVNGQPLDESPLKDHPLNPMRDANLARVLTRQSRGKVGLIDLPTVTDGA
DAVRARLDRLRAEGAAAAIADAVFERDLETLGKAALEMPVSTGASGLGLGLARALLRSGR
ASASDGENEAIRPVGGLAAVVAGSCSAATLKQLDAAELHMPVLRLDTEKLLAGSDEISAA
IAWAGERIGEGPVAIAASAAPEVVSRLQARYGREASGHAVETATAAIAGELVERGVRRLV
VAGGETSGATVDRLGIPAFLIGPEIAPGVPLLRTIGTGGNDMLLTLKSGNFGGEDFFATA
LSMMR