Protein Info for SM_b20408 in Sinorhizobium meliloti 1021
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 47% identical to ACXC_XANP2: Acetone carboxylase gamma subunit (acxC) from Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2)
KEGG orthology group: K10856, acetone carboxylase, gamma subunit [EC: 6.4.1.6] (inferred from 100% identity to sme:SM_b20408)MetaCyc: 47% identical to acetone carboxylase gamma subunit (Xanthobacter autotrophicus Py2)
Acetone carboxylase. [EC: 6.4.1.6]
Predicted SEED Role
"Acetone carboxylase, gamma subunit (EC 6.4.1.6)" (EC 6.4.1.6)
MetaCyc Pathways
- acetone degradation II (to acetoacetate) (1/1 steps found)
Isozymes
Compare fitness of predicted isozymes for: 6.4.1.6
Use Curated BLAST to search for 6.4.1.6
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q92WE6 at UniProt or InterPro
Protein Sequence (165 amino acids)
>SM_b20408 hypothetical protein (Sinorhizobium meliloti 1021) MTEYSKEVINDLVNGTLPWPQTRRIMSAYKDHDRFFKYLAVLQDRVAWSDPILLPVGDRL FICDSAEGRVARCECGYSFGDYRRNWKLNAVINVRDTEESLREIYPNSDIPDPRWMEIRE FFCPECAHLHEVEAAAPGYPIVHDFEPDLEGFYRDWLGKPLKDLS