Protein Info for SGL_RS17290 in Synechocystis sp000284455 PCC 6803

Annotation: aspartate kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 TIGR00656: aspartate kinase, monofunctional class" amino acids 1 to 416 (416 residues), 407.4 bits, see alignment E=6.9e-126 PF00696: AA_kinase" amino acids 3 to 232 (230 residues), 186.4 bits, see alignment E=1.8e-58 TIGR00657: aspartate kinase" amino acids 63 to 417 (355 residues), 414.2 bits, see alignment E=7.7e-128 PF01842: ACT" amino acids 275 to 321 (47 residues), 30 bits, see alignment 9.1e-11 amino acids 450 to 512 (63 residues), 42 bits, see alignment E=1.5e-14 PF13840: ACT_7" amino acids 351 to 413 (63 residues), 57.7 bits, see alignment E=2.1e-19 amino acids 523 to 583 (61 residues), 54.1 bits, see alignment 2.9e-18 PF22468: ACT_9" amino acids 358 to 416 (59 residues), 81.4 bits, see alignment 7.9e-27 amino acids 452 to 505 (54 residues), 31.7 bits, see alignment 2.6e-11 amino acids 530 to 588 (59 residues), 87.5 bits, see alignment 9.7e-29

Best Hits

KEGG orthology group: K00928, aspartate kinase [EC: 2.7.2.4] (inferred from 100% identity to syn:slr0657)

Predicted SEED Role

"Aspartokinase (EC 2.7.2.4)" in subsystem Lysine Biosynthesis DAP Pathway or Threonine and Homoserine Biosynthesis (EC 2.7.2.4)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.2.4

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (600 amino acids)

>SGL_RS17290 aspartate kinase (Synechocystis sp000284455 PCC 6803)
MALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQISPN
PCRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTEAEHSRARILEIRPDR
LEHHLREGKVVVVAGFQGISSVEHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGI
LTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSDEPGT
KVVAPPVQNRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQVDID
LIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAEIIVEKGIAKIAI
AGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRDADRAIAALSNAFGVTL
SPPKNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQ
RCRINQGTPCRDIAFMVAEGDSSQAEAILQPLIKDWLDAAIVVNKAIAKVSIVGSGMIGH
PGVAAHFFAALAQENINIEMIATSEIKISCVVPQDRGVDALKAAHSAFNLAGTKTVTVPA