Protein Info for SGL_RS13880 in Synechocystis sp000284455 PCC 6803

Annotation: aminodeoxychorismate/anthranilate synthase component II

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 196 TIGR00566: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase" amino acids 1 to 193 (193 residues), 241.9 bits, see alignment E=2.3e-76 PF00117: GATase" amino acids 3 to 192 (190 residues), 197.6 bits, see alignment E=1.6e-62 PF07722: Peptidase_C26" amino acids 69 to 177 (109 residues), 42.6 bits, see alignment E=6.3e-15

Best Hits

Swiss-Prot: 58% identical to TRPG_PSEAE: Anthranilate synthase component 2 (trpG) from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

KEGG orthology group: K01658, anthranilate synthase component II [EC: 4.1.3.27] (inferred from 99% identity to syn:slr0055)

MetaCyc: 58% identical to anthranilate synthase beta subunit (Pseudomonas aeruginosa PAO1)
Anthranilate synthase. [EC: 4.1.3.27]

Predicted SEED Role

"Anthranilate synthase, amidotransferase component (EC 4.1.3.27) @ Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85)" (EC 2.6.1.85, EC 4.1.3.27)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.6.1.85, 4.1.3.27

Use Curated BLAST to search for 2.6.1.85 or 4.1.3.27

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (196 amino acids)

>SGL_RS13880 aminodeoxychorismate/anthranilate synthase component II (Synechocystis sp000284455 PCC 6803)
MILVIDNYDSFTYNLVQYLGELGQKYAVAEDLKVYRNDQISLEEVKSLQPDAIVISPGPG
RPDDAGISLQLIEKLSASTPILGVCLGHQSIGQVFGGKVVAAPELMHGKTSQIYHQQQGI
FAGLASPVQATRYHSLIVERESLPECLEVTAWLADGMVMAFQHRDYPHVQSVQFHPESIL
TKEGKQMLENFLQSLG