Protein Info for SGL_RS13080 in Synechocystis sp000284455 PCC 6803

Annotation: rhodanese-related sulfurtransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 278 PF17773: UPF0176_N" amino acids 3 to 94 (92 residues), 90.9 bits, see alignment E=5.8e-30 PF00581: Rhodanese" amino acids 113 to 206 (94 residues), 44.7 bits, see alignment E=1.6e-15

Best Hits

Swiss-Prot: 100% identical to Y765_SYNY3: UPF0176 protein sll0765 (sll0765) from Synechocystis sp. (strain PCC 6803 / Kazusa)

KEGG orthology group: K07146, UPF0176 protein (inferred from 100% identity to syn:sll0765)

Predicted SEED Role

"Rhodanese domain protein UPF0176, cyanobacterial/alphaproteobacterial subgroup"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (278 amino acids)

>SGL_RS13080 rhodanese-related sulfurtransferase (Synechocystis sp000284455 PCC 6803)
MAYQVTTFYHFTRLNCLAEKQSRWQELGDRLGLKGTILLAEEGVNATIAGESAAIEEMVK
IMAADLGLTSVPQRHSWAKTIPFQRMKVKIKPEIVSLGQPQVNPEKQVGTYVSPQQWNQL
LQDPDVVVIDTRNDYEVAIGTFQGAVNPCTKKFRQFPDYVKNNLDQQKNKKVAMFCTGGI
RCEKASAYLLEEGFAEVYHLRGGILHYLETIAPEESLWQGECFVFDERVAVQEGLKVGSH
ALCDHCGYPLRVGDLAEIRYAVRHCPQCGLTVAVSNEL