Protein Info for SGL_RS11535 in Synechocystis sp000284455 PCC 6803

Annotation: sugar transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

Best Hits

KEGG orthology group: None (inferred from 100% identity to syn:sll1535)

Predicted SEED Role

"Undecaprenyl-phosphate galactosephosphotransferase (EC 2.7.8.6)" (EC 2.7.8.6)

MetaCyc Pathways

Salmonella enterica serotype O:3,10 O antigen biosynthesis (1/5 steps found)
Porphyromonas gingivalis O-LPS antigen biosynthesis (1/6 steps found)
Salmonella enterica serotype O:2 O antigen biosynthesis (1/6 steps found)
Salmonella enterica serotype O:4 O antigen biosynthesis (group B1) (1/6 steps found)
Salmonella enterica serotype O:9 O antigen biosynthesis (1/6 steps found)
Salmonella enterica serotype O:9,46 O antigen biosynthesis (1/6 steps found)
Salmonella enterica serotype O:8 O antigen biosynthesis (1/8 steps found)
Salmonella enterica serotype O:9,46,27 O antigen biosynthesis (1/9 steps found)
succinoglycan biosynthesis (1/14 steps found)

Isozymes

Compare fitness of predicted isozymes for: 2.7.8.6

Use Curated BLAST to search for 2.7.8.6

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (243 amino acids)

>SGL_RS11535 sugar transferase (Synechocystis sp000284455 PCC 6803)
MTANSSPISVKALRALMRRGFYPTVSPRRYQGSRSSSLTGTVAKRVFDICFSLSVLVLCS
PLYLAIALMIAVSSPGPIFYVQERVGRKFKRFKCIKFRTMVTNADEVLEKLMAGCPQTRE
EFEKNFKLRNDPRITWIGKFLRLTSLDEFPQFWNVLKGDMSLVGPRPLVPEELHKYGRQI
NQVLSIKPGLTGLWQVSGRNDIPYPERVQIDVYYVYYRTMTLDLLIIAKTLGVMLFPNNN
GAY