Protein Info for SGL_RS09515 in Synechocystis sp000284455 PCC 6803

Annotation: glycosyltransferase family 2 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 276 PF13641: Glyco_tranf_2_3" amino acids 11 to 128 (118 residues), 46.6 bits, see alignment E=6.8e-16 PF00535: Glycos_transf_2" amino acids 12 to 175 (164 residues), 128.8 bits, see alignment E=3.1e-41 PF10111: Glyco_tranf_2_2" amino acids 13 to 109 (97 residues), 58 bits, see alignment E=1.7e-19

Best Hits

KEGG orthology group: None (inferred from 100% identity to syn:slr2116)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (276 amino acids)

>SGL_RS09515 glycosyltransferase family 2 protein (Synechocystis sp000284455 PCC 6803)
MNEEKQQELLISVIITNYNYDQFIDQAIESVLSQTYYNFELIIVDDGSTDNSRDVISSYT
DSRIKALVKNNGGQASAFNAGFEQANGEIICFLDSDDWWKPEKLETIIRWHYFINKDYAI
FQHVLDVWYEGKTRPYKHILPSGDCFAEMKKVKKLDFFVPTSGLSFPKKILDRIFPIPIK
FIIAADSYIMRTACVFNMVYSIPKSLGFYRQHDNTVFLNPDFDLQPFLKEILIPELNQFY
QKYRINYQIEISDYNFNERKKNKKQKIFEYLKKVFF