Protein Info for SGL_RS08955 in Synechocystis sp000284455 PCC 6803

Annotation: alpha/beta hydrolase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.

Best Hits

Swiss-Prot: 100% identical to Y249_SYNY3: Uncharacterized protein sll0249 (sll0249) from Synechocystis sp. (strain PCC 6803 / Kazusa)

KEGG orthology group: None (inferred from 100% identity to syn:sll0249)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (251 amino acids)

>SGL_RS08955 alpha/beta hydrolase (Synechocystis sp000284455 PCC 6803)
MTNQNMPPETPIIWLNFSPALRRFDRPLLRQLGKSQAILQWDYHQTADEPNCLTVGLDLI
GEYLENFHQPVHLIGHSTSGLLALLYARQCPEKVRSLSLLSVGVYPALDWQAHYYSQFDA
MRYSRHLLLGQMAHHLFNCRSLRQTQTIVNILENDLLTSISPHSLYKQLIILPNHIAVPL
LVAVGETDGIIDTSLFNGWQRWKKPGDRLWLCPEGKYFFQFEHPEITAFQLQQFWRSLQG
QEASSSTSLLA