Protein Info for Rv3329 in Mycobacterium tuberculosis H37Rv
Annotation: Probable aminotransferase
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to Y3329_MYCTU: Probable aminotransferase Rv3329 (Rv3329) from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
KEGG orthology group: None (inferred from 100% identity to mbo:Mb3362)MetaCyc: 37% identical to taurine:pyruvate aminotransferase subunit (Bilophila wadsworthia RZATAU)
Taurine--pyruvate aminotransferase. [EC: 2.6.1.77]
Predicted SEED Role
"Omega-amino acid--pyruvate aminotransferase (EC 2.6.1.18)" in subsystem Pyruvate Alanine Serine Interconversions (EC 2.6.1.18)
MetaCyc Pathways
- superpathway of coenzyme A biosynthesis II (plants) (9/10 steps found)
- β-alanine biosynthesis II (5/6 steps found)
- β-alanine degradation II (2/2 steps found)
- taurine degradation I (1/1 steps found)
- hypotaurine degradation (2/3 steps found)
- superpathway of taurine degradation (3/6 steps found)
KEGG Metabolic Maps
- Alanine and aspartate metabolism
- Propanoate metabolism
- Taurine and hypotaurine metabolism
- Valine, leucine and isoleucine degradation
- beta-Alanine metabolism
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.6.1.18 or 2.6.1.77
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (438 amino acids)
>Rv3329 Probable aminotransferase (Mycobacterium tuberculosis H37Rv) LHFARHGAGIQHPVIVRGDGVTIFDDRGKSYLDALSGLFVVQVGYGRAELAEAAARQAGT LGYFPLWGYATPPAIELAERLARYAPGDLNRVFFTSGGTEAVETAWKVAKQYFKLTGKPG KQKVISRSIAYHGTTQGALAITGLPLFKAPFEPLTPGGFRVPNTNFYRAPLHTDLKEFGR WAADRIAEAIEFEGPDTVAAVFLEPVQNAGGCIPAPPGYFERVREICDRYDVLLVSDEVI CAFGRIGSMFACEDLGYVPDMITCAKGLTSGYSPLGAMIASDRLFEPFNDGETMFAHGYT FGGHPVSAAVGLANLDIFEREGLSDHVKRNSPALRATLEKLYDLPIVGDIRGEGYFFGIE LVKDQATKQTFTDDERARLLGQVSAALFEAGLYCRTDDRGDPVVQVAPPLISGQPEFDTI ETILRSVLTDTGRKYLHL