Protein Info for Rv2977c in Mycobacterium tuberculosis H37Rv
Annotation: Probable thiamine-monophosphate kinase ThiL (thiamine-phosphate kinase)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to THIL_MYCTO: Thiamine-monophosphate kinase (thiL) from Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
KEGG orthology group: K00946, thiamine-monophosphate kinase [EC: 2.7.4.16] (inferred from 99% identity to mtb:TBMG_00992)Predicted SEED Role
"Thiamine-monophosphate kinase (EC 2.7.4.16)" in subsystem Thiamin biosynthesis (EC 2.7.4.16)
MetaCyc Pathways
- superpathway of thiamine diphosphate biosynthesis II (10/11 steps found)
- superpathway of thiamine diphosphate biosynthesis I (8/10 steps found)
- thiamine diphosphate biosynthesis I (E. coli) (2/2 steps found)
- thiamine diphosphate biosynthesis II (Bacillus) (2/2 steps found)
- thiamine diphosphate salvage II (4/5 steps found)
- thiamine diphosphate salvage V (2/3 steps found)
- thiamine diphosphate salvage I (1/2 steps found)
KEGG Metabolic Maps
Isozymes
No predicted isozymesUse Curated BLAST to search for 2.7.4.16
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (333 amino acids)
>Rv2977c Probable thiamine-monophosphate kinase ThiL (thiamine-phosphate kinase) (Mycobacterium tuberculosis H37Rv) VTTKDHSLATESPTLQQLGEFAVIDRLVRGRRQPATVLLGPGDDAALVSAGDGRTVVSTD MLVQDSHFRLDWSTPQDVGRKAIAQNAADIEAMGARATAFVVGFGAPAETPAAQASALVD GMWEEAGRIGAGIVGGDLVSCRQWVVSVTAIGDLDGRAPVLRSGAKAGSVLAVVGELGRS AAGYALWCNGIEDFAELRRRHLVPQPPYGHGAAAAAVGAQAMIDVSDGLLADLRHIAEAS GVRIDLSAAALAADRDALTAAATALGTDPWPWVLSGGEDHALVACFVGPVPAGWRTIGRV LDGPARVLVDGEEWTGYAGWQSFGEPDNQGSLG