Protein Info for Rv1657 in Mycobacterium tuberculosis H37Rv
Annotation: Probable arginine repressor ArgR (AHRC)
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 100% identical to ARGR_MYCBP: Arginine repressor (argR) from Mycobacterium bovis (strain BCG / Pasteur 1173P2)
KEGG orthology group: K03402, transcriptional regulator of arginine metabolism (inferred from 100% identity to mtc:MT1695)Predicted SEED Role
"Arginine pathway regulatory protein ArgR, repressor of arg regulon" in subsystem Arginine Biosynthesis extended or Arginine Deiminase Pathway or Arginine and Ornithine Degradation
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
Find the best match in UniProt
Protein Sequence (170 amino acids)
>Rv1657 Probable arginine repressor ArgR (AHRC) (Mycobacterium tuberculosis H37Rv) MSRAKAAPVAGPEVAANRAGRQARIVAILSSAQVRSQNELAALLAAEGIEVTQATLSRDL EELGAVKLRGADGGTGIYVVPEDGSPVRGVSGGTDRMARLLGELLVSTDDSGNLAVLRTP PGAAHYLASAIDRAALPQVVGTIAGDDTILVVAREPTTGAQLAGMFENLR