Protein Info for RS_RS23750 in Ralstonia solanacearum GMI1000
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
No protein families (PFam or TIGRFam), signal peptides, or transmembrane helices were found in this protein.
Best Hits
KEGG orthology group: None (inferred from 100% identity to rso:RS02084)Predicted SEED Role
"FIG00974765: hypothetical protein"
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See Q8XQB2 at UniProt or InterPro
Protein Sequence (2483 amino acids)
>RS_RS23750 hypothetical protein (Ralstonia solanacearum GMI1000) MTRITHASSHDYPRSHDNQAPASSTHPRKRNRDPAHDASSSFDGLPRRTDSRRHPEHVPA PKRQRVSVADRQETASHASAPHPQHRARTTAEAPRRQRSDREPPARQAKRARHDRSDAIR TETGRARTAPAPAQARDRHDPSDARRRAPAAVPQRPTPEARASFRKQFARTRKLDDDESD LLWTIASDALSHRDCGKALRLLERPAVDFMDSLACFANFVRAVSALLESAGRLGLSERAT DQLKRKWEESSHAFYAVHHDMAIDNERFVSKLASLCNRWSQAQPAQGAGCVAVARILESL GMRYGPGLLRNRLADTNPLLGRDMSLLINAFSKWPEDEACRVGAQLLAGVVADEQDALLS PVQYQPQALARLVGGVSKWPDDKTCRQAAAAMAGALWQRRQELDNPEAFKPQELAMCLNG LSKFTDAACEQAAMAVAGAVLSRKAQLLDPGTCPSQHLSMILNGLSKWPLREPARLAAVE VAAALWHRRRDMTDTGQFNAQDVSNCLNGLSKWHGDATCRQAAVALAEALPRHRDAHNDL PDFLPMHLASCLNGLSKWPEEASCRQAAAAVARALLWRKADLDDAERFSAQHLSNCLHGL SKWPDEDSCRQAALAVADALVRRLGTPGGADAFTPQQVSNCINGLSKWPEEPACKLAAVA MATALWRRRDALDDAAQFTGQGLANCLHGLSKWPTEDPCRKAALAVVGALMPRWSSVAVA GDPFLPQLLSNCLNGLSKWPEEDSCRKAALTVAETLMRHRRALADPRQFTPQELSNCING LSKWPEAPGCREAALAVAEALLLRRDELGDTEAFGAIGLAACLNGLSKWPGEATCRRAAL AVAEALLLGWDTLAADGQLTPQRLANSLNGVSRWLQDAASQEVSIRIIGMLGSGGQPFGA FTMAQLAQLANGTARFILELGHAGEADDGDAIQSDASMALAQARLRELAAHLDSRPDRLA QAETRNVALILKALASTGLKDGLRLLAHQGLTRLAALYAETGFKPDNLEALASVAAGLLP VARAPELKAYRADALRLLDQMQPAVDRKIRLYIDAHLAAADPRRPAAAEAPPSLQIRRDG EAFGTRRPGLTFFLLLKAYSVVADCWKRSNVPDIPLPAHARRDALRTWVAEMLDRTRGAI ETDLDEMSWNLIAQIEAADQVLDAVDLKLHKDLDTILAAHPPTPLNVGDVRRELRALPEV RDMMHSDAGAAAIEVIDLAGRNLTPHRPDETRDTAASQYAFFTRLTSGRLPLLEVQLPGK VSAFMLTRVIRRGGDLLRMDLFGGSHLKPTKVHMRSLLGASGTKGGIKRYGRIPAMRLAD TAPDAALMKDVIRKLNPQREDWFRMQRALLEVVPRDHVVEGPIRLALLPDRLPGSPPAFA LRTPEGAAIQLVPNDGCGFIRESLACRIPVIRQAMHSAQALEGESQRMSLLPPQATHHFP RDQATIEEARAHLRASLRDDPELWVANPDDGTRDIKTHKLYEALAGALIMGTQGIAVPSG DDRLHLPRDKSKVFDATGGTVLLGKPPYDKANLMPVTADRIGTCDNGDATARFLDTAFAF QYSYTAWDETGNPPAAADDVPMLHGKGVTIVVPDKMWPQDNDAQWVWSTEDMKVHSSWTD GRRRDRLAPRMDTVGSLRVKEIFPPGALMALPINELKKRDADCDGDKVFLYAGLPRMTQA VTRFFEERERRIGKLGSFKPPKTAHGVLDAEGRYQAGRAAEVLSALHGQELVGRLSTLQF LFFGQPPALQQTLAERTLFGVYEGTERELRRGVRALLRGERATTPQVMEDLLLRAGLGVQ HACHPVALEVARALEAQLLEVMREAQPPVRAVSPDTASRAPQALSGGSTLLFAPLTQAYE SATTPRERLAALVTHYPRARLPHPATILPTTPPKQPDPLAQPAPLDDAPIGQSGYVPGAP LETLHNLLTLGVKIGTDAPKAVTQTDLFLDIADHLEGTLRSSPERIRFMPYTRSGVMQEL SQGRFNAQATLQRLRDNPTLAAGLMEMAIEELLAHGAIEGTPPLRTTPAETEAQLRHCAR TLHAAARLVEPEITPVIKAAIEGIGALRGQAHRVKTERALHDKLRVLLHRGHPSPADAAA MVNDALRYSVVLKPDDFAAGYAEVLGNLDRAGLIKTRVHNAFKPAWDPFKGINVKFMGRD AAGQSVRLEVQFHTDETFALKMRYHDNYKQDFELQMQGASVEQRVACLEEARQACRQVAT PAGCEHIGDWNNEPPQVNKRRAQAKAAQLPGAGAGKRPDAMATQVERLLQAAVRIEREVG PLLQTMQLHVIREHSVVKKAKSIEKKIQRLCVLNGITPEQAADRVRDAMRWIIQLPHETF GAHAQKALETLTANGLRITRVNNSFMARNRTYAGLNVKLQTREALNFEIQFHTGDSLYTR NKTHKIYRQWQDTDVEQRQATDPAQRQALQKANADRLAALKTYAATVPTPIGAERIPSFD RYRRDGASASDRARAERTAAPES