Protein Info for RS_RS23240 in Ralstonia solanacearum GMI1000

Annotation: sulfite exporter TauE/SafE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 260 signal peptide" amino acids 1 to 25 (25 residues), see Phobius details transmembrane" amino acids 48 to 66 (19 residues), see Phobius details amino acids 78 to 98 (21 residues), see Phobius details amino acids 104 to 122 (19 residues), see Phobius details amino acids 142 to 164 (23 residues), see Phobius details amino acids 171 to 196 (26 residues), see Phobius details amino acids 207 to 226 (20 residues), see Phobius details amino acids 232 to 256 (25 residues), see Phobius details PF01925: TauE" amino acids 6 to 253 (248 residues), 136.6 bits, see alignment E=5.6e-44

Best Hits

KEGG orthology group: K07090, (no description) (inferred from 100% identity to rso:RS05309)

Predicted SEED Role

"FIG00975449: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XQG3 at UniProt or InterPro

Protein Sequence (260 amino acids)

>RS_RS23240 sulfite exporter TauE/SafE family protein (Ralstonia solanacearum GMI1000)
MLFLFLLAGLTAGFFAGMFGIGGGAIVIPILVHVYRDAGMDMTEAIRLAFGTSLATMAFT
GLSSYLSHRQRGNVDGAWLRKLMLPSGLGALVGGIIAARIPGGWLALGLALMLGYFGIKL
LVQRSDAVVAWPWLERYRHVAGFLSGLTYSLAGMGGASVITFYLTKAGLSLRAAIGTATG
VILPISVGAILGFGLTAGSPHDWRWGYIDLRALLALSVCSIVASKLGVKTAAWLPVAVLR
KGFGFFMFVLAGKTLLGTLS