Protein Info for RS_RS20850 in Ralstonia solanacearum GMI1000

Annotation: aminoacyl-tRNA synthet

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 PF00133: tRNA-synt_1" amino acids 27 to 538 (512 residues), 157.3 bits, see alignment E=5.3e-50 PF09334: tRNA-synt_1g" amino acids 32 to 167 (136 residues), 27.9 bits, see alignment E=1e-10

Best Hits

KEGG orthology group: None (inferred from 100% identity to rso:RS01925)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XRP9 at UniProt or InterPro

Protein Sequence (650 amino acids)

>RS_RS20850 aminoacyl-tRNA synthet (Ralstonia solanacearum GMI1000)
MRWPEPPHASGEPAAPRPPEARPGRFVLLPPPNVTGDLHLGHGFSFTLLDTYVRYFRSRG
EVVHFFPGTEHAGSRAEIAYKRQHGGQWDMAAFQRWQQETRQSIVRQIACIGVDADWHAE
YNSMDRERVRFMRQAFVKLHGDGYIYPSTEMVNWCPCCRTSISEIDVKSSVQRVPRLLVS
HADAGMAVTIATYGLERLLGATALRIVPAHPRFDQLVGREVSLLGCRLRIEAGSEHPDLD
SRYLTICNPQVNPADFKPPGTAAPVNTYDCDGNVSGDYPAFRKDTLAASRIAVEQALARD
GWTIAREEADHQVAHCGVCSTALHPLVSEQWYFDIRKGLARAGKPPQFHSALWQKGFELW
LDKLRRPIANRYHETLNTSDYGGYATNRDFQVSSQSLWGQALPVWRCRGCGATVVAEDHP
AQCGQCAGAGFEASPEVISIFFSCCLMGPSANPSGELRNAVDFTVCGHDIYHYWGSLKNI
LACALGYEAGFGSLMVHGLLVDQHGEKMTKSKGNVIDIRAVVERHGVEALRAAVYDAAHK
DANKPHIRFDIGQLDRLKPRVAELGRKLAQPVTADDASGSPMTQAEVAAAEAEVDRLMQA
FRVGAAYRAVMALADRPALAFASTSVRQAFCRLLSPFHPSLAASPPPKHP