Protein Info for RS_RS20595 in Ralstonia solanacearum GMI1000

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 413 transmembrane" amino acids 15 to 38 (24 residues), see Phobius details amino acids 45 to 69 (25 residues), see Phobius details amino acids 76 to 99 (24 residues), see Phobius details amino acids 105 to 125 (21 residues), see Phobius details amino acids 161 to 189 (29 residues), see Phobius details amino acids 227 to 249 (23 residues), see Phobius details amino acids 259 to 280 (22 residues), see Phobius details amino acids 292 to 310 (19 residues), see Phobius details amino acids 316 to 339 (24 residues), see Phobius details amino acids 347 to 373 (27 residues), see Phobius details amino acids 379 to 400 (22 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to rso:RS01724)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XRV5 at UniProt or InterPro

Protein Sequence (413 amino acids)

>RS_RS20595 hypothetical protein (Ralstonia solanacearum GMI1000)
MPGSTAMSPRIPSSFWPLALLGFIVPSVTIFQTLAVAWQLSKTGAITSVLPTMVALGAAT
RIASGIPLGHWVRVNGANASCFMALWIEVFVLLGMGIVLSGIGSIWLLVPLEITSALAIT
GFLISRQTLLKEMLTESNGREAAAGVNRALTYASKLILPVVGGSLLIFIDAYVALLCCSA
VLALSAILLRSSIFRCQSSRQNPAGKDDFIGGIRKTLSFYGGSPEALDAVILIALFNFVL
APLTVIIPMHVSKLPFATSLSLGLSEASLGAGAVCGALLFSRLRTGSPKHSSLLVAGASL
VLLVSAQPEITFGYHLFNLSLFALAMSVAYSGSLIDSLFIRLIPSSLYATVVGVQILLVG
VSYPLGLCVSSWFLKSESFVAIIASYDAALALFAFALLQVREITRCSANRHPT