Protein Info for RS_RS19605 in Ralstonia solanacearum GMI1000

Annotation: bacteriophage N4 adsorption protein A

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 585 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF14559: TPR_19" amino acids 55 to 116 (62 residues), 26.2 bits, see alignment E=8.1e-10 PF13283: NfrA_C" amino acids 410 to 581 (172 residues), 167.9 bits, see alignment E=1.6e-53

Best Hits

KEGG orthology group: None (inferred from 100% identity to rso:RS00388)

Predicted SEED Role

"Bacteriophage N4 adsorption protein A"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XSG7 at UniProt or InterPro

Protein Sequence (585 amino acids)

>RS_RS19605 bacteriophage N4 adsorption protein A (Ralstonia solanacearum GMI1000)
MNAARHTLRPLPARLRWPIAMAVWALCHGALAEPAAMQPLSPDAYRHADRAYQSIAANQL
DAAEQAARAALGVQPDSLQLNLLLLDVLTRKGQLEAARAQADAVLARFPDQPRVYAQHGF
LAQRAQQPEVAEQDFARALEGTDWTPQEQRNLRLAWSDSAYAAKHPDAALQALAPLQDQP
DPDIQIRLAQARLQAGDREGAAHAAALAGAQSDDPVRQGYARALFAQATNAGAAQDAAAL
PANDPRVIGQRALNEAYGHLRAHDDRAALDAFQRGFATGEGNWTHYADAAYAAKRLGDNP
TAISLFRASLDHADADRADDGAGGGDPTGSQPLPPDRRFGYRREVEQMQRTWGAVLSSAY
QASAFGLPSNRSILQGGAEVYWQPPGIGYQDGRILQVFVRGYDNLHDGSGAPTGMPTAQG
SVGARYKPIKDANLVFTAERLVKIGNQSVNDTLLRIGYSSDEGIDLQVTKPRWQTWQVFA
EGAYFVNAGRLIVSGEARYGHTWRVDSISDRLTVYPHIVLAGDHDNKADRQLAAGIGPGV
NFRYWFRESKYAAPASWLDLTVQFRMALTHADRAKGVVARAILWF