Protein Info for RS_RS19195 in Ralstonia solanacearum GMI1000

Annotation: IucA/IucC family siderophore biosynthesis protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 589 PF04183: IucA_IucC" amino acids 142 to 385 (244 residues), 216.9 bits, see alignment E=3.2e-68 PF06276: FhuF" amino acids 404 to 571 (168 residues), 125.5 bits, see alignment E=2.9e-40

Best Hits

KEGG orthology group: None (inferred from 100% identity to rso:RS00879)

Predicted SEED Role

"Siderophore staphylobactin biosynthesis protein SbnF @ Siderophore synthetase superfamily, group C"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XSP5 at UniProt or InterPro

Protein Sequence (589 amino acids)

>RS_RS19195 IucA/IucC family siderophore biosynthesis protein (Ralstonia solanacearum GMI1000)
MTPTEFDALLDSGAYRDAAQRVVRQLLEALLFEGALPDVAWSGDVLSIAGTREDGAPLVY
RCRARRTVSFGRIRIVSPVRRICGSQESDADDVARVVAELGAQLGADPLRLAQFSAELLA
THIKDAQTRAAQAGHLLREAGYDAIEAGLTGAHPYHPGYKSRMGFTLDDNRRYAPECASG
VTPLLLAARRDRCRWSASRDVGQGEPRHLLSASEQAAFDARLAQLGLDPADYLPLPVHPW
QWEALVETAYHTAFARRELVPIGMLSERYAPQQSIRTLANTGRRDAPSLKLAMSLVNTST
SRVLAPHTVRNAALMSDWLADLAERTDWPAPLARPVFLKEIAGVGYVPQTPVAGQYGALA
CIWRESVHRHLRAGEAALPVTAITHVDADGRPLVADWVARHGVQAWVRRLVERVWLPVLH
MLWRNGTALESHAQNMVLLHVDGLPERVALKDFHDGVRYSRRWLRVAPPALEGPPAEHAR
VNPNSFIETDDVDELRDFTGDALFFVNLAEIAWFFACHFGLDEAAFWEIAAGAIRDYQAN
CPDLADSFARFDCFAPTMQIELLASRRFLPEIRLRTRAANNPLAQMEYA