Protein Info for RS_RS19120 in Ralstonia solanacearum GMI1000

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 652 transmembrane" amino acids 220 to 243 (24 residues), see Phobius details amino acids 417 to 439 (23 residues), see Phobius details amino acids 442 to 450 (9 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 100% identity to rso:RS00864)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XSR0 at UniProt or InterPro

Protein Sequence (652 amino acids)

>RS_RS19120 hypothetical protein (Ralstonia solanacearum GMI1000)
MIGMTTKLAALELLRKRLLSSADANLQSLGHLIDTHPEFCRMGALGTALGDFSPVRLPAD
APLGSSGANPYVELWKLVFNVFGGDGTTTNPGLKPVLDKIRTLLDKLDTIAAAEDLDALK
AMSGEVDTLNQIATDLNAILVAIKGDGTLANLGIVPRVVDLIGAHAQPAMVRPRVGGGVG
FPPRFWTVRDFLSKRRTGKFARQLWDSAQSSGDDRFRAYALGWLSSWSLSAGGASAVASI
VGAPYRNQWWRSRFVGNYIDLWSYGYAKVGPRPKPYTDWPNLCAQELHKTVELPGAGFDP
VQMMKDLHLGNALGTALPAEFTAWWLNAYETVYGDLGTNRPQMDADKLNDAYAMAWLVLW
FQTSRESLGCNAVAPVAPTNCGGAPPWSNPVVPGDAGAGVGGPPPPEIDKKVKPGNVVCA
IILAILGIVAFCFGGWVAGGAAIAGAIALAATAGTIDWDKFRCSLVWYRVYMYNGLRALH
DVMSLGGLVHPYTPELSADDTAVQLLSSIPTHIRTGDHIVMSRPGQERYPAVPWDGSGFT
WFEDATGALEAPMRVAALAAAYPSGFLDDPANPLGSRSTFDAAPWPFATQGAGMQTPAGF
INTVDAMLGWLAAPTGTPLPEHDLDGDRGLGHQNWHFINDDWTNPVNIEPSA