Protein Info for RS_RS14155 in Ralstonia solanacearum GMI1000

Annotation: DNA gyrase inhibitor YacG

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 25 50 71 PF03884: YacG" amino acids 6 to 53 (48 residues), 87.8 bits, see alignment E=1.5e-29

Best Hits

Swiss-Prot: 100% identical to YACG_RALSO: DNA gyrase inhibitor YacG (yacG) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K09862, hypothetical protein (inferred from 100% identity to rso:RSc2830)

Predicted SEED Role

"FIG003276: zinc-binding protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XVK0 at UniProt or InterPro

Protein Sequence (71 amino acids)

>RS_RS14155 DNA gyrase inhibitor YacG (Ralstonia solanacearum GMI1000)
MNMKTVKCPTCGKPVPWTPESRYRPFCSERCKQIDLGAWAAEQYTIPVVEDDDLPPDAPG
GESGGASGRLN