Protein Info for RS_RS13785 in Ralstonia solanacearum GMI1000

Annotation: SMP-30/gluconolactonase/LRE family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF08450: SGL
  • amino acids 13 to 263 (251 residues), 260.8 bits, E=6.8e-82

Best Hits

KEGG orthology group: K13874, L-arabinonolactonase [EC: 3.1.1.15] (inferred from 100% identity to rso:RSc2755)

Predicted SEED Role

"L-arabinolactonase (EC 3.1.1.15)" in subsystem L-Arabinose utilization (EC 3.1.1.15)

MetaCyc Pathways

• L-arabinose degradation IV (5/8 steps found)
• L-arabinose degradation III (3/6 steps found)
• L-arabinose degradation V (2/6 steps found)
• superpathway of pentose and pentitol degradation (12/42 steps found)

KEGG Metabolic Maps

• Ascorbate and aldarate metabolism

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.1.1.15

Sequence Analysis Tools

See Q8XVS4 at UniProt or InterPro

Protein Sequence (303 amino acids)

>RS_RS13785 SMP-30/gluconolactonase/LRE family protein (Ralstonia solanacearum GMI1000)
MIAIPLSDLRCTLGEGIVWDDALGVLWWTDIQESLLWQHDPATGRERQWPMPQRVGSFVL
TATPGVLIVGLAKQVARFDARTGALTPLVDVEAGNPATRINDGRADRAGNYVFGTLHEGG
PQALGSFYRFTPLGVLQRLALPGIAIANSIAFSPEGTTMYWCDTPSRRIHACDYDGQTGT
VARVRVFADLRDADAGTAHRGSPDGSTVDADGCLWNAEWGGNRVTRYAPDGRVLAHHPVP
ASQPTCPAFGGAALDTLYLASARDGLSARRLAEDVLAGAVFRLAVGGVRGLPEARFGDAC
IPA