Protein Info for RS_RS11295 in Ralstonia solanacearum GMI1000

Annotation: 3-oxoadipate enol-lactonase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 270 transmembrane" amino acids 90 to 108 (19 residues), see Phobius details TIGR02427: 3-oxoadipate enol-lactonase" amino acids 10 to 260 (251 residues), 359.9 bits, see alignment E=3.4e-112 PF00561: Abhydrolase_1" amino acids 24 to 246 (223 residues), 76.5 bits, see alignment E=3.9e-25 PF12146: Hydrolase_4" amino acids 25 to 231 (207 residues), 38.3 bits, see alignment E=1.4e-13 PF12697: Abhydrolase_6" amino acids 28 to 252 (225 residues), 45.3 bits, see alignment E=2.7e-15

Best Hits

Swiss-Prot: 43% identical to ELH2_ACIAD: 3-oxoadipate enol-lactonase 2 (catD) from Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

KEGG orthology group: K01055, 3-oxoadipate enol-lactonase [EC: 3.1.1.24] (inferred from 100% identity to rso:RSc2250)

MetaCyc: 50% identical to subunit of 3-oxoadipate enol-lactone hydrolase (Pseudomonas putida)
3-oxoadipate enol-lactonase. [EC: 3.1.1.24]

Predicted SEED Role

"Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24)" in subsystem Catechol branch of beta-ketoadipate pathway or Chloroaromatic degradation pathway or Protocatechuate branch of beta-ketoadipate pathway (EC 3.1.1.24)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 3.1.1.24

Use Curated BLAST to search for 3.1.1.24

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XX66 at UniProt or InterPro

Protein Sequence (270 amino acids)

>RS_RS11295 3-oxoadipate enol-lactonase (Ralstonia solanacearum GMI1000)
MPWLEHDNVRLYHEFDDGPAPAKPVLVLSNSLGTDLGMWAPQLEALRRHFRLLRYDTRGH
GRSSVPDAPFGVAQLGGDVLALLDHYDIEFALFCGLSMGGVTGLWLAAHHGERFPRMVVS
NTAAQIGTQQSWNARIAQVEQRGMGAITETVLERWFTDGYRVAAPARVDLVKAMLLATPP
AGYNGNCAAIRDADLRAQLEAIRVPLLAIGGTHDISTPAAQTRAIAQGVPGAQYVELSAG
HLANWEQAEAYTDVLVGFLTTGVAREAVHG