Protein Info for RS_RS10775 in Ralstonia solanacearum GMI1000

Annotation: esterase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 343 transmembrane" amino acids 165 to 182 (18 residues), see Phobius details amino acids 188 to 209 (22 residues), see Phobius details PF00756: Esterase" amino acids 66 to 232 (167 residues), 24.8 bits, see alignment E=4.4e-09 PF10503: Esterase_PHB" amino acids 70 to 276 (207 residues), 221.3 bits, see alignment E=2.7e-69 TIGR01840: esterase, PHB depolymerase family" amino acids 72 to 266 (195 residues), 122.4 bits, see alignment E=9.1e-40 PF00326: Peptidase_S9" amino acids 111 to 262 (152 residues), 38.1 bits, see alignment E=3.1e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to rso:RSc2149)

Predicted SEED Role

"Poly(3-hydroxybutyrate) depolymerase"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XXG5 at UniProt or InterPro

Protein Sequence (343 amino acids)

>RS_RS10775 esterase (Ralstonia solanacearum GMI1000)
MKSVSRLVNALIPTSLGRPAWPPKPVKPARPATRRPRPAVTPTPTAGTFVRERFIYEPES
PAVVARRPEYWLYTPPSRGSTPPALMVMLHGCKQSAEALAHGTRMNALADREGFIVLYPE
QPRRAHPQCCWHWYDPEHAGAHEADDLARLVAQTLTETGADPSRVYLAGLSAGAGLAGLM
ALRHPHLFAALALHSGPVLGVARTAASALNLMRRGARIDPVEALATMVDTGTYPGIPTLL
LHGLRDEAVSPVNQAQLATQFRALNHLCDAADVRRETTRGDGYVLRSDLRDDACLLATCQ
FTSTGHAWSGGDPRYAFHAAGPDATWLWWQFARQHARTTAPAT