Protein Info for RS_RS07165 in Ralstonia solanacearum GMI1000

Annotation: EamA/RhaT family transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 313 signal peptide" amino acids 1 to 24 (24 residues), see Phobius details transmembrane" amino acids 36 to 56 (21 residues), see Phobius details amino acids 77 to 102 (26 residues), see Phobius details amino acids 122 to 142 (21 residues), see Phobius details amino acids 154 to 175 (22 residues), see Phobius details amino acids 195 to 217 (23 residues), see Phobius details amino acids 227 to 249 (23 residues), see Phobius details amino acids 259 to 279 (21 residues), see Phobius details amino acids 288 to 308 (21 residues), see Phobius details PF00892: EamA" amino acids 3 to 136 (134 residues), 37.3 bits, see alignment E=1.5e-13

Best Hits

KEGG orthology group: None (inferred from 100% identity to rso:RSc1428)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XZG7 at UniProt or InterPro

Protein Sequence (313 amino acids)

>RS_RS07165 EamA/RhaT family transporter (Ralstonia solanacearum GMI1000)
MGIGVLCALLAGAMWGMVFIAPRALPAFSPWELALGRYLAYGAIAALAAAPILPRIARKL
TRADCLALMRQACSGNLVYYVLLAFGVQLAGVAPVSLIIGVLPITVTVLGRRDHGAVPLS
RLAWPLLVVAAGIACINIDLFSHDAVAAGDAHPIWSRIAGIACAAGALCSWTWYAIDNAR
HLQRNPHFSSNEWSALYGISTGALSAALTAAAVLAAGTGWAEGGGRVWTTFWAVNAAVAL
GASLIGNNLWNIAARRLPLTLSGQMIVFETLFALAYGFVYDHRWPRPLEMAAIALLIVGV
GWSVRLHADDNSA