Protein Info for RS_RS06860 in Ralstonia solanacearum GMI1000

Annotation: ribosomal-protein-alanine N-acetyltransferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 177 TIGR01575: ribosomal-protein-alanine acetyltransferase" amino acids 32 to 165 (134 residues), 121.3 bits, see alignment E=1.5e-39 PF00583: Acetyltransf_1" amino acids 40 to 142 (103 residues), 58 bits, see alignment E=2.3e-19 PF13673: Acetyltransf_10" amino acids 51 to 148 (98 residues), 39.5 bits, see alignment E=1.1e-13 PF08445: FR47" amino acids 62 to 147 (86 residues), 28.2 bits, see alignment E=3.1e-10 PF13508: Acetyltransf_7" amino acids 64 to 143 (80 residues), 48.2 bits, see alignment E=2.3e-16

Best Hits

KEGG orthology group: K03789, ribosomal-protein-alanine N-acetyltransferase [EC: 2.3.1.128] (inferred from 100% identity to rso:RSc1368)

Predicted SEED Role

"Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)" in subsystem Bacterial RNA-metabolizing Zn-dependent hydrolases or Conserved gene cluster associated with Met-tRNA formyltransferase or Ribosome biogenesis bacterial (EC 2.3.1.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.3.1.-

Use Curated BLAST to search for 2.3.1.- or 2.3.1.128

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8XZM7 at UniProt or InterPro

Protein Sequence (177 amino acids)

>RS_RS06860 ribosomal-protein-alanine N-acetyltransferase (Ralstonia solanacearum GMI1000)
MSQVQVDRALAGLIVRAPLPAGWRAERMSALDVAAVAAVEQAAFAFPWSRGNFEDSLKSG
HLGIVLRDGGNQVAGYLILMPVVDEMHLLNVTVAPAWQRQGLGRWLLRAAQALTLAHGFA
SLLLEVRPSNAGAIALYRRVGFAEIGRRKRYYPAENNTREDALVMRIACEAGGVEAA