Protein Info for RS_RS01315 in Ralstonia solanacearum GMI1000

Annotation: dienelactone hydrolase family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 308 signal peptide" amino acids 1 to 33 (33 residues), see Phobius details PF02129: Peptidase_S15" amino acids 56 to 191 (136 residues), 38.8 bits, see alignment E=1.8e-13 PF12146: Hydrolase_4" amino acids 91 to 194 (104 residues), 28.2 bits, see alignment E=2.4e-10 PF00326: Peptidase_S9" amino acids 97 to 173 (77 residues), 41.9 bits, see alignment E=1.7e-14 PF01738: DLH" amino acids 138 to 262 (125 residues), 22.9 bits, see alignment E=1.1e-08

Best Hits

KEGG orthology group: None (inferred from 100% identity to rso:RSc0268)

Predicted SEED Role

"Dienelactone hydrolase and related enzymes"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8Y2R7 at UniProt or InterPro

Protein Sequence (308 amino acids)

>RS_RS01315 dienelactone hydrolase family protein (Ralstonia solanacearum GMI1000)
MESDVNHAHRPGWRRAWAVLGCALLLATAARADDPPPAGMTEQVVEVPKPAGIFTIRLET
TIFKPAGDGPFPLIVLNHGKAHGKPAFQDRARYLAQAAALVARGYVVALPMRQGFARSGG
AYIGGGCNVESNGIVQAEDVVAALDYLTQQPYVDRSRIVVMGQSHGGLTTMAFGTLAYPG
VRGLVNFAGGLRNDTCVAWEDNLVHAFGNYGKQSRYPSLWFYGDNDSYWPRPLPEKLFAA
YTGAGGKARLVDFGTFQGDSHGMFGSRAGLPIWLPEVDAFLRELGLPSGPVPASTPASAS
ADANQDTQ