Protein Info for RS_RS00645 in Ralstonia solanacearum GMI1000

Annotation: phosphatase PAP2 family protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 657 signal peptide" amino acids 1 to 27 (27 residues), see Phobius details PF01569: PAP2" amino acids 240 to 345 (106 residues), 48.4 bits, see alignment E=8.3e-17 PF12951: PATR" amino acids 510 to 537 (28 residues), 32.2 bits, see alignment (E = 9.1e-12) TIGR02601: autotransporter-associated beta strand repeat" amino acids 510 to 538 (29 residues), 32.3 bits, see alignment (E = 3.3e-12)

Best Hits

KEGG orthology group: None (inferred from 100% identity to rso:RSc0131)

Predicted SEED Role

"serine protease"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See Q8Y350 at UniProt or InterPro

Protein Sequence (657 amino acids)

>RS_RS00645 phosphatase PAP2 family protein (Ralstonia solanacearum GMI1000)
MSINTTRFQSGLVAVCGALALTACGGGDDTAAGDNSVATVQAIPAPPADPGFVDSAPVAT
SVPAFVDNIATNQRGDARYATLGTNAGVRLFTRFLDLWQPLTEIVDAGVSAPANGSFPAV
VASTWTGLPNDGTAGGTQLNLPVLNANVQYVVSATTGRTQAQADAAYFDDRRGKGYSVTD
GMGPLTTTWRTLTQQTTSITTVPADATTVLYNDSGNNTGVSTASGNTTFGKVVDLINTMG
NNASTEPAKRFYKYARPYRWSSSVVVVPTLVPAESSNPATDGGFISGHSAEAVRDAMAMA
YLVPERFQQMLARGLELGENRIFAGMHSPLDVIGGRMLGLAAVAANLYDPANATLKATAY
TQAHTALMAQTGTDATTFAAFAQSGTLTTDRFADYATNQANFTRRMTFGFSQINSTALAP
VVPKGAEVLLETRFPYLSADQRRVVLKTTELASGYPVMDDAEGWGRLNLFAAADGYGAFN
GSVVVSMDASQGGFNAADTWRNAVAGAGKLTLQGTGTLRLAGSNTYTGGTQVAGGVLGAD
SATAFGTGDVYLGGGTLVVNAPSALNVAGKFTQLQGTTLELDIGANGQGKLSVAGLTTIA
GGTLHVKFASGYSPKVGDTITVIDGAGSNRQFTSVVVDGFKATALYTSTGIQIRLDA