Protein Info for RR42_RS33905 in Cupriavidus basilensis FW507-4G11

Annotation: transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 690 transmembrane" amino acids 12 to 37 (26 residues), see Phobius details amino acids 57 to 78 (22 residues), see Phobius details amino acids 83 to 102 (20 residues), see Phobius details amino acids 109 to 127 (19 residues), see Phobius details amino acids 140 to 160 (21 residues), see Phobius details amino acids 364 to 384 (21 residues), see Phobius details amino acids 390 to 407 (18 residues), see Phobius details amino acids 417 to 436 (20 residues), see Phobius details amino acids 442 to 460 (19 residues), see Phobius details amino acids 467 to 486 (20 residues), see Phobius details amino acids 492 to 512 (21 residues), see Phobius details PF04632: FUSC" amino acids 9 to 674 (666 residues), 654.7 bits, see alignment E=1.9e-200 PF13515: FUSC_2" amino acids 22 to 151 (130 residues), 59.7 bits, see alignment E=3.2e-20

Best Hits

KEGG orthology group: None (inferred from 69% identity to reh:H16_B1275)

Predicted SEED Role

"Fusaric acid resistance domain protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YEZ5 at UniProt or InterPro

Protein Sequence (690 amino acids)

>RR42_RS33905 transporter (Cupriavidus basilensis FW507-4G11)
MASWPSARQWLFSLKAFAASMLALYIALALGLPRPYWAMATVYFVSHPLTGATRSKAAYR
VAGTVLGATAAVVTVPLLVNAPVLLMAAIALWTGGLLYFSLLQRTPRSYVFLLAAYTLPI
VALPAVSEPAQVFDIAVARIEEIVIGILCAGMVGAIVFPAKVAPALRARCATWLADAALW
ATDMLSADPDANATRHGSRHRLAADILALDQLITQLSYDTESAHTLRHARALRERMTMLL
PVLSALAGVLQALRRHAEGIPDSLARHMAAMSAWIRAGFDGPAPALEPEAGPWADYARAP
GWHGGLVATANDQLRTLAALCEDCHALQHGIGDQAASAAAPSMRALGRGAERADRAHHHD
HAMLLFYACSTSLAVFCAGMLWIALGWEDGAGSVAVASIACCFFATIEEPRPVAHSFLRW
SGFCFAVSSFYLFLVVPNAHNFETLVGMLALPYMGIGMLISRPGFNLIAMLLSVNTASFA
NVQSVYDTNFLTTFNASLASIGGMLFAPLWAMATRPFGARVAAHRLIRASWKDLAQAATR
REPGEHARLGGRMLDRLSQLVPRLAASDDKMASDGFAELQVGFGALALQRSLPGQHPAAR
RAVARVLNAVALHFRARLKAGHAMAPPDALSERIDKALREVAMQSGASQSPGEPARSALG
ALIALRVTLYPTQPQPLQAVPIPLQAQPRC