Protein Info for RR42_RS33460 in Cupriavidus basilensis FW507-4G11

Annotation: glutathione S-transferase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 361 transmembrane" amino acids 312 to 325 (14 residues), see Phobius details PF08327: AHSA1" amino acids 16 to 146 (131 residues), 99.7 bits, see alignment E=5.2e-32 PF13417: GST_N_3" amino acids 159 to 228 (70 residues), 58.2 bits, see alignment E=2.9e-19 PF02798: GST_N" amino acids 161 to 222 (62 residues), 33.5 bits, see alignment E=1.5e-11 PF13409: GST_N_2" amino acids 163 to 223 (61 residues), 51.2 bits, see alignment E=5.3e-17 PF00043: GST_C" amino acids 270 to 342 (73 residues), 42.3 bits, see alignment E=2.5e-14 PF14497: GST_C_3" amino acids 272 to 352 (81 residues), 29.5 bits, see alignment E=2.5e-10 PF13410: GST_C_2" amino acids 279 to 342 (64 residues), 29.2 bits, see alignment E=2.8e-10

Best Hits

KEGG orthology group: K00799, glutathione S-transferase [EC: 2.5.1.18] (inferred from 79% identity to rso:RSc0992)

Predicted SEED Role

"Putative glutathione s-transferase transmembrane protein (EC 2.5.1.18)" (EC 2.5.1.18)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.5.1.18

Use Curated BLAST to search for 2.5.1.18

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YMJ3 at UniProt or InterPro

Protein Sequence (361 amino acids)

>RR42_RS33460 glutathione S-transferase (Cupriavidus basilensis FW507-4G11)
MTQAATFHLEMDRFIRAPREKVFDAFTSQAALSEWHCPRGMHVLEASADARVGGRYRIVM
GGRDGARHIVGGEYQAIDRADFLAYTWFWETGPMPPQIKTLIEVTLTAKDGGTHLHMRHS
GFPEAGQRDSHMGGWQSVFNRLSDFLDPEGSAGSVTVIGDPRSSYCRTVRMALAEKGVAY
KLQPVPPHSPEVLAHSPFGRIPVLSDGPLSFYETRAILAYIEEAFEGPSLLARQAGAIGH
ARCEQWISLINCHAYDAMVRRYVLQYIFPKGENGQPERAVIDAALPEIATQLGAFDEAYG
NRDYLVGTAMSMADLFLAPILAYVGMFPEGAALLEKCPNVRRAQAVMRERPSFVATQPQM
G