Protein Info for RR42_RS31680 in Cupriavidus basilensis FW507-4G11

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 298 PF02129: Peptidase_S15" amino acids 14 to 275 (262 residues), 60.6 bits, see alignment E=5.2e-20 PF01738: DLH" amino acids 18 to 135 (118 residues), 23.8 bits, see alignment E=7.6e-09 PF12146: Hydrolase_4" amino acids 30 to 273 (244 residues), 32.7 bits, see alignment E=1.2e-11 PF00561: Abhydrolase_1" amino acids 32 to 276 (245 residues), 31 bits, see alignment E=5.2e-11 PF05448: AXE1" amino acids 89 to 145 (57 residues), 25.9 bits, see alignment E=9.9e-10

Best Hits

KEGG orthology group: K06889, (no description) (inferred from 100% identity to reu:Reut_C6038)

Predicted SEED Role

"Hydrolases of the alpha/beta superfamily"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YP60 at UniProt or InterPro

Protein Sequence (298 amino acids)

>RR42_RS31680 hypothetical protein (Cupriavidus basilensis FW507-4G11)
MFQRTDIAFEAEGGVTLRGWLYVPAGGTGPHPAITMAHGYAGVKEHGLERFAEKFASNGF
VVLLHDHRNFGASDGTPRQDIDPWRQIADWRRAISFLEHQDVVDPKRIGLWGTSYSGGHA
LVLGATERRLRAVVTQVPTISGFEQGLRRIPPDAVAAIEEAFSADERAQARGEPPRRQTI
VSADPAVPASYRAKDAIEFYLQPVPDGAWENSVTVRSTRAARMYEPGAWIARVSPTPLLM
IVALQDTITLTDLELAAYERALEPKRLVTIPGGHFDPYVARFDQSSAAALDWFKEHLA