Protein Info for RR42_RS18000 in Cupriavidus basilensis FW507-4G11

Annotation: cell division protein ZapD

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 252 PF07072: ZapD" amino acids 16 to 226 (211 residues), 268.7 bits, see alignment E=1.9e-84

Best Hits

Swiss-Prot: 92% identical to ZAPD_CUPTR: Cell division protein ZapD (zapD) from Cupriavidus taiwanensis (strain DSM 17343 / BCRC 17206 / CIP 107171 / LMG 19424 / R1)

KEGG orthology group: None (inferred from 92% identity to reh:H16_A3259)

Predicted SEED Role

"FIG002842: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YGE1 at UniProt or InterPro

Protein Sequence (252 amino acids)

>RR42_RS18000 cell division protein ZapD (Cupriavidus basilensis FW507-4G11)
MILYEYPFNERIRTLLRLEDLFDRLDYFLGQDHALQHHVALTTLFEIIDVAGRADLKTDL
LKELERQRQALAALRANPQIDQGALDGVISEIEQAMAQLNQTVGKAGQLLTDNEWLTSIR
SRAIIPGGTCEFDLPAYYAWQHRPVEDRRADILKWVRPLVPLRLGTNTVLRLLRESGQSG
KVIATGGSYQQMLSGRSYQLMQVLLDESLLAFIPEMSANKYMLWVRFTQQDGDLRPRSVD
ADIPFLLKLCNF