Protein Info for RR42_RS16570 in Cupriavidus basilensis FW507-4G11

Annotation: 2-nitropropane dioxygenase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 357 PF03060: NMO" amino acids 17 to 342 (326 residues), 174.2 bits, see alignment E=5e-55 PF01070: FMN_dh" amino acids 97 to 237 (141 residues), 32.4 bits, see alignment E=5.2e-12

Best Hits

KEGG orthology group: None (inferred from 52% identity to bpt:Bpet0267)

Predicted SEED Role

"2-nitropropane dioxygenase NPD"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YFJ8 at UniProt or InterPro

Protein Sequence (357 amino acids)

>RR42_RS16570 2-nitropropane dioxygenase (Cupriavidus basilensis FW507-4G11)
MCRRLGIRYPIFGLAHSIEVAAAISNAGGLGVYAAARDGPNELARKLRDLRALCPGVPVG
VDLLLPTSLPGVSTPEDIAAAIPEGHRRFVDSLFARFNVPEATRGNFFSQYVRSQALFEE
QVTAVAQSDMDVFAAGVGTPADTLARVRRAGKTTMALVGAVKHAQKAIAAGVDVLVAQGY
DAGGHTGNVGTFTLVPQIIAAAGGRPVLAAGGVGEGSQIAAALAMGAQGAWLGTVWLGST
EHGLPAALTDRLLSAGSEDTVITRAHSGKPCRVVRSAFSDAWEAPGAPAPLGMPYQQALT
GRLLAAVEEHEVAPLMYEAAGQSVAWVREVEPVAHIVERLVRETRQSLENLRSYLPL