Protein Info for RR42_RS13915 in Cupriavidus basilensis FW507-4G11

Annotation: ATPase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 766 PF00004: AAA" amino acids 311 to 443 (133 residues), 54 bits, see alignment E=2.4e-17 amino acids 559 to 680 (122 residues), 100 bits, see alignment E=1.4e-31 PF01057: Parvo_NS1" amino acids 543 to 581 (39 residues), 23.1 bits, see alignment 3.3e-08 PF07728: AAA_5" amino acids 559 to 633 (75 residues), 25.5 bits, see alignment E=1.1e-08

Best Hits

KEGG orthology group: None (inferred from 90% identity to reu:Reut_A2234)

Predicted SEED Role

"Cell division protein FtsH (EC 3.4.24.-)" in subsystem Bacterial Cell Division (EC 3.4.24.-)

Isozymes

Compare fitness of predicted isozymes for: 3.4.24.-

Use Curated BLAST to search for 3.4.24.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

See A0A0C4YBC9 at UniProt or InterPro

Protein Sequence (766 amino acids)

>RR42_RS13915 ATPase (Cupriavidus basilensis FW507-4G11)
MDFTRFAEDDRSTLLRAAAGSPCTSALDWMCAQFALRVVCSLGPRFNLRSNINDILTVSA
QEMVWPYGVVLRVQRFLAARCADMPAWKGAARLTPEEFLERHGQWNSAFDESALFYYLDE
YVKHHAKDMFAVFDASAAALAERLDGERVLLVRNIDMLSHVLDLPEHERKLLLYAALAKY
KRDLRAVMVDCKVAHSQEAFQILAGLTGASPAAVAASLRPGSRLETLNLIEQPLPENSVT
DLGDLMRLSDRLLHVLLGNYANEAEMMAVFTRPAAAPTLGTGDYPHVETDARYLSALLAN
ATQQHACGVNVLIYGPPGTGKTEFARLLAREAGCELYEVDCLDRDGNSLSGKDRYRSLQV
SQAFLRGRPRTALLFDEVEDVFPGSARELTSLFGQEDPRGSVNGKAWVNQTLEQNPVPVI
WISNSIRQIDPAYLRRFQFHLELKIPPPLVRENIIRKHLGTLDVSDAFIASLAARKTLTP
AQVQSAARFVQLAGSGVAEPVEALILRQLDHADRAMGLRPEVEGRPVVTHYRLDYLNLET
RYEVGKIVQALKARQRGTLCFYGPPGTGKTALAEHIAAALEQPLMIRRASDLMSKYVGET
EQQIAAMFARAEEDGAILLLDEADSFMQSRQNAVRNYEVSEVNEMLQGMERFNGIFVCTT
NLFERIDEAALRRFSFKIRFLPLKPEQRMAMFVEEALDAEPQRMDATMREELAKMDCLTP
GDFATVKRQCVLLGETLTPDEFLAQLRQEHAVKPDVRQRRPLGFLQ