Protein Info for RR42_RS09480 in Cupriavidus basilensis FW507-4G11

Annotation: amino acid ABC transporter ATP-binding protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

• PF00005: ABC_tran
  • amino acids 19 to 166 (148 residues), 133 bits, E=1.2e-42

Best Hits

Swiss-Prot: 49% identical to OCCP_AGRT4: Octopine permease ATP-binding protein P (occP) from Agrobacterium tumefaciens (strain Ach5)

KEGG orthology group: K02028, polar amino acid transport system ATP-binding protein [EC: 3.6.3.21] (inferred from 96% identity to reh:H16_B1810)

MetaCyc: 42% identical to L-arginine ABC transporter ATP binding subunit (Escherichia coli K-12 substr. MG1655)
ABC-4-RXN [EC: 7.4.2.1]

Predicted SEED Role

No annotation

Isozymes

Compare fitness of predicted isozymes for: 3.6.3.21

Use Curated BLAST to search for 3.6.3.21 or 7.4.2.1

Sequence Analysis Tools

See A0A0C4YAM8 at UniProt or InterPro

Protein Sequence (244 amino acids)

>RR42_RS09480 amino acid ABC transporter ATP-binding protein (Cupriavidus basilensis FW507-4G11)
MPIVEAQGVHKSYGPVEVLKGVSFAIEPGQVVAIIGRSGSGKSTMLRCLNGLETINAGNI
TVAGHKLDHDRKRLLDLRRDVGMVFQSYNLFPHLTVGENIALAPAIVKKMATDKIDGIVD
QVLAQVGLQDKKDCYPEQLSGGQQQRVAIARSLAMEPKVMLFDEVTSALDPELTAEVLRV
MENLAASGMTMVLVTHEMEFARRMAHTTIFMHQGKVHEAGPSKALFAQPRTPELQQFLSA
GALK