Protein Info for RR42_RS01500 in Cupriavidus basilensis FW507-4G11
Annotation: hypothetical protein
These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.
Protein Families and Features
Best Hits
Swiss-Prot: 58% identical to Y3380_VIBCH: Putative esterase VC_A0580 (VC_A0580) from Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
KEGG orthology group: None (inferred from 60% identity to xcv:XCV0179)MetaCyc: 52% identical to 1,4-dihydroxy-2-naphthoyl-CoA hydrolase (Escherichia coli K-12 substr. MG1655)
RXN-9311 [EC: 3.1.2.28]
Predicted SEED Role
No annotation
MetaCyc Pathways
- superpathway of chorismate metabolism (45/59 steps found)
- 2-carboxy-1,4-naphthoquinol biosynthesis (3/7 steps found)
- superpathway of menaquinol-8 biosynthesis I (5/10 steps found)
- superpathway of demethylmenaquinol-8 biosynthesis I (4/9 steps found)
- superpathway of menaquinol-10 biosynthesis (4/10 steps found)
- superpathway of menaquinol-11 biosynthesis (4/10 steps found)
- superpathway of menaquinol-12 biosynthesis (4/10 steps found)
- superpathway of menaquinol-13 biosynthesis (4/10 steps found)
- superpathway of menaquinol-6 biosynthesis (4/10 steps found)
- superpathway of menaquinol-7 biosynthesis (4/10 steps found)
- superpathway of menaquinol-9 biosynthesis (4/10 steps found)
- superpathway of demethylmenaquinol-6 biosynthesis I (3/9 steps found)
- superpathway of demethylmenaquinol-9 biosynthesis (3/9 steps found)
- superpathway of phylloquinol biosynthesis (4/15 steps found)
Isozymes
No predicted isozymesUse Curated BLAST to search for 3.1.2.28
Sequence Analysis Tools
PaperBLAST (search for papers about homologs of this protein)
Search CDD (the Conserved Domains Database, which includes COG and superfam)
Predict protein localization: PSORTb (Gram-negative bacteria)
Predict transmembrane helices and signal peptides: Phobius
Check the current SEED with FIGfam search
Find homologs in fast.genomics or the ENIGMA genome browser
See A0A0C4Y4I0 at UniProt or InterPro
Protein Sequence (139 amino acids)
>RR42_RS01500 hypothetical protein (Cupriavidus basilensis FW507-4G11) MLWKSPPSLKDLQARHKDTAVEQLGIEFTEIGEASLSARMPVDRRTVQPHGILHGGASVL LAETLGSCAASLCLDSETQYCVGLDINANHVRAARTGFVTGTATPVHIGRTTHVWAIEIR NEEGKMVCVSRITMSILSR