Protein Info for RALBFv3_RS22615 in Ralstonia solanacearum IBSBF1503

Annotation: non-ribosomal peptide synthetase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 2897 PF00501: AMP-binding" amino acids 30 to 368 (339 residues), 300.7 bits, see alignment E=2.8e-93 amino acids 1089 to 1435 (347 residues), 307.9 bits, see alignment E=1.9e-95 amino acids 2154 to 2232 (79 residues), 87.7 bits, see alignment (E = 1.5e-28) amino acids 2232 to 2509 (278 residues), 219.1 bits, see alignment E=1.8e-68 TIGR01733: amino acid adenylation domain" amino acids 51 to 442 (392 residues), 453.6 bits, see alignment E=1.4e-139 amino acids 1110 to 1509 (400 residues), 438.3 bits, see alignment E=6.3e-135 amino acids 2232 to 2583 (352 residues), 389.6 bits, see alignment E=3.9e-120 PF13193: AMP-binding_C" amino acids 426 to 501 (76 residues), 51.5 bits, see alignment (E = 3.3e-17) amino acids 1493 to 1568 (76 residues), 50.4 bits, see alignment (E = 6.8e-17) amino acids 2567 to 2642 (76 residues), 48.5 bits, see alignment (E = 2.7e-16) PF00550: PP-binding" amino acids 528 to 591 (64 residues), 56.6 bits, see alignment (E = 4.9e-19) amino acids 1594 to 1658 (65 residues), 56.3 bits, see alignment (E = 6.5e-19) PF00668: Condensation" amino acids 613 to 1070 (458 residues), 287.9 bits, see alignment E=2.8e-89 amino acids 1679 to 2135 (457 residues), 307.5 bits, see alignment E=3.1e-95

Best Hits

Predicted SEED Role

"Siderophore biosynthesis non-ribosomal peptide synthetase modules @ Bacillibactin synthetase component F (EC 2.7.7.-)" (EC 2.7.7.-)

KEGG Metabolic Maps

Isozymes

Compare fitness of predicted isozymes for: 2.7.7.-

Use Curated BLAST to search for 2.7.7.-

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (2897 amino acids)

>RALBFv3_RS22615 non-ribosomal peptide synthetase (Ralstonia solanacearum IBSBF1503)
MFVADEAPLLQGADAALQQPATESSIPALFEQQVARDPEAIAVTFGRTQLSYAELNARAN
RLAHHLIGLGVQPEDRIAVALHRCIDLPVAMLAIFKAGAVYLPLDPNYPAERIAFMLDDA
RPALLLTASAMQADLHATGLRQLCPDELVLDGLPAHNPGLPITPQHAAYLIYTSGSTGKP
KGVLVSHRGVPHLVSTHMRRCELGPGCRVLQFASPSFDAALSELLRPLLSGATSVMAPPD
ELVPGTPLADLLQREHITHVTLPPAVLAVMPEDSLASVRYLIVAGEAVSPALVERWHHGR
RMINAYGPTEATVLASMSAPMAGADDLSIGTPIDNAQIHLLDATMQPVPIGAAGELCIGG
PGVARGYLNRPGLTAERFVADPFGPPGARLYRSGDLGRWRHDGTIEFLGRIDEQVKIRGF
RIEPGEVQAVLEQHPEVAQATVIAREDQPGNRQLVGYVVAADATEPEPAALRRYLAERLP
DYMVPAAVVMLDTLPLTPNGKIDRKALPAPDFAAHASYREAQTPNEHALAALFAEALGLP
RVGIDDDFFALGGHSLLATRLVSRIRATLQVDLSVHALFKAPCVAQLAARLDAADASADR
PPKLAAQARPDTDTLPLSFAQQRLWFLHRFEGPSASYNIPSCWRLRGDIDCAALEAALAD
LVGRHESLRTVFPETASGPYQRILDGASARPALERVRLDHRPDPETALQNALRDAVQSGF
DLATQLPLRATLFALGPDDHVLLLLLHHIAADGESVAPLMADLAVAYAARRNGQAPGWAP
LPLQYADYTLWQHALLARPDDPHSHAGRQLAYWRDALAGTPELCSPIPDRPRPAVSSDRN
AAFRLDLPPALHRALVAAGQRHGASLFMVLHAALAIVLSRLGAGADIVVGSPIAGRTDTA
LDPLIGFFVNTLALRTDTSGDPDIATLLRQVRERCLGAYAHQDLPFERVIEALNPTRTLS
AHPLFQVMLGLQSAGQQPQLDLAGLRAAHLPVHVPVVKCDLVFNMWESADAGNAPAGLHG
HIEYAVDLFDAPTVERLVRQWQRVLHAIVAAPGSRISAIDLLDDDDRRLLQGWSTTAQPV
PEASIPALFEQQAARAPEAVAIVCDDRRLTYAELNARANRLAHHLIGLGVRTEDRVAVLL
DDSTDFVIAIAAVLKAGAVYTPLSSRYPDERKQWIMADAAAGVLLVKGEAPEGLRASAMP
GRVIDIDDPALARQPATNPGHAIAPDQLAYVIYTSGSTGRPKGVAVTHANIASFAADRRW
RNGDHTRVLAHSPHAFDASTYELWVPLLTGGQIVAAPPGNLEPATLRQLIDTAGVTAVFM
TTAMFRLAMDTDPACLRGLRTLWTGGERASAAAFERMRAVCPDTALVHVYGPTETTTYAI
AYPVPTQGDMAENVPLGGPLDNTQIHLLDAMLQPVPIGAAGELCIGGPGVARGYLNRPGL
TAERFVADPFGPPGARLYRSGDLGRWRHDGTIEFLGRIDEQVKIRGFRIEPGEVQAVLEQ
HPEVAQATVIAREDQPGNRQLVGYVVAADVGEPEPAALRRYLAERLPDYMVPAAVVMLDT
LPLTPNGKIDRKALPAPDFTAQSASRKPRTPTEQALATLFANTLGLDKVGIDDSFFDLGG
HSLLATRLASRIRSMLNVELPVRALFEAPTVALLAQRVMADQAMAIEGPVLAPVPRPDAI
PLSFAQQRLWFLHRLEGPSPTYNVPSCWRLRGPLDTAALEAALADLAARHESLRTVFSET
SETPCQRILDAAHARPALECIRLDDRPAPEAALHDALQTAVQYSFDLAAQLPLRATLFTL
GADEHVLLLLLHHIAADGESIGPLMADLAVAYAARRSGRAPAWAPLAVQYVDYTLWQHAL
LARPDDPQTRAGHQLAYWREALAGTPELCTFPADRARPAIPSHRGAAVPLHIAPALHRDL
VAVGQRHGASLFMVLQTALAILLGRLGAGADIVVGSPIAGRTDATLDPLVGFFVNTLALR
TDTSGDPDIATLLRQVRERCLTAYAHQDLPFERVIEALNPTRTLSAHPLFQVMLGLQNAS
QQPRFDLAGMQAAHLPVPVPVVKFDLVFNLREWADTRDATGGLHGHIEYAVDLFDAPTIE
RLARQWQRILEAIVAAPERRISAIDLLDSDDRRLLQRWNATAQPVPEASIPALFERQVAR
DPEAIAVIFGQTQLSYAELNARANRLAHHLIELGVQPEDRVAVALHRCIDLPVAMLAVFK
AGAVYLPLDSNYLAILKAGAVYLPVDSKYPAERIAFMLDDTRPALLLTSSVTRANLHTTG
LRQLCLDDLALDSLPAHNPGLPITPQHAAYLIYTSGSTGKPKGVLVSHRGVPHLVSTHMR
RCELGPGCRVLQFASPSFDAALSELLRPLLSGATSVMASPDELVPGTPLAGLIQRERITH
ATLPPAVLAVMPEDSLASVRYLIVAGEAVSPALVARWHHGRRMINAYGPTEATVLASMSA
PMAGADDLSIGTPIDNAQIHLLDATMQPVPIGAAGELCIGGPGVARGYLNRPGLTADRFV
ADPFGPPSARLYRSGDLARWRHNGTIEFLGRIDDQIKIRGFRIEPGEVQAVLEQHPEVAQ
ATVIAREDQPGNRQLIGYVVAADAVKPEPAALRRYLAGRLPDYMVPAAVVMLDALPLTPN
GKIDRKALPAPAFAGHADAQRARARRAVRRGAGAGCGRRRRQLLRPRRPFAARHAPGQPD
PRRAGRGPAGACAVRSAVRGATCPTAGHRRGRRRSGHCAAPARGGQQAPAVLRPHGHRTR
LALRGAGRARGPRGPGLRAAIALPRRGRPAARRHRRGGRSLYRRNAGGPAARAVSPAGLV
DRRRDRPPHRHAAGTARPRGGTAGAAGQPPRAAHAGATADGCAVAAPVPRHHRLARRRGR
GGNRASARHARTHPRAA