Protein Info for RALBFv3_RS19085 in Ralstonia solanacearum IBSBF1503

Annotation: tyrosine protein kinase

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 transmembrane" amino acids 32 to 51 (20 residues), see Phobius details amino acids 446 to 466 (21 residues), see Phobius details TIGR01005: exopolysaccharide transport protein family" amino acids 15 to 750 (736 residues), 1160.5 bits, see alignment E=0 PF02706: Wzz" amino acids 16 to 108 (93 residues), 78.2 bits, see alignment E=1.6e-25 PF13807: GNVR" amino acids 388 to 468 (81 residues), 103.3 bits, see alignment E=1.9e-33 TIGR01007: capsular exopolysaccharide family" amino acids 525 to 729 (205 residues), 151.5 bits, see alignment E=2.2e-48 PF01656: CbiA" amino acids 547 to 718 (172 residues), 39.6 bits, see alignment E=1.7e-13 PF10609: ParA" amino acids 552 to 713 (162 residues), 32.2 bits, see alignment E=2.7e-11 PF13614: AAA_31" amino acids 554 to 702 (149 residues), 52.6 bits, see alignment E=2e-17

Best Hits

Swiss-Prot: 99% identical to EPSB_RALSL: Putative tyrosine-protein kinase EpsB (epsB) from Ralstonia solanacearum

KEGG orthology group: None (inferred from 94% identity to rsl:RPSI07_mp1012)

Predicted SEED Role

"Tyrosine-protein kinase Wzc (EC 2.7.10.2)" in subsystem Colanic acid biosynthesis (EC 2.7.10.2)

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 2.7.10.2

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (750 amino acids)

>RALBFv3_RS19085 tyrosine protein kinase (Ralstonia solanacearum IBSBF1503)
MTQNLPQPPAVNAPENELDLVRYLDVLVANRWLIAGIAAAVMLLGAAYAFLARPVYEADI
MVQVEDNPNSAKSLLGDVSSLFDVKTDANAEIEILRSRMVVGKAVDNLHLYITAKPHYFP
LIGAWISSRATRLSEPGLFGLGGYVWGTETIDVDGFDVPEALEGQPFKLIVLGNGRYRLE
NKSLDAPIEGVVGEPLEAKQSIGTIQLQVNNLTAKAGATFELERDSRLKTMEMLQDKLKI
AEKGKQSGIIGASLDGTNPALTAAIMNQIATEYVAQNIKRKAEEAERSLVFLDGLLPQLK
LELERAEMKYNEMRNLRGTFDLSEEGKAFLQESVTVETSLQELKQKRAELLTRFTASHPG
VQAIDQQISVMSGKVGSMARRLKSLPNIEQDTVRLMRDVQVDNDLYVSLLNDMQQLKLVK
AGKVGNVRLVDGAAVPEEPVKPKKLTVTALAGVLGVVLGVMAAFVRNALFGGITDPQDIE
EHTGLSVYATVPLSDTQVDLSGQLTTRKRGQYLLARRVPDDPSIEALRSLRTALQFAMQD
AGNNLVVLTGPTPGVGKSFVSANLAAVIATGGKRVLLIDADMRKGYLHQYFGKDRKPGLL
DLLAGNRSIEQVVHREVVPGLDFIATGLFPHNPSELLLNPRMVELMDTFRSQYDLVLVDT
PPVLAVADTAILAARAGTVLLVTRFERSTLGEIRETIKQLQHANVDVRGVVFNALDPNTY
RYGYGSRYGRYRYVQYGYTSNSKPPEAESA