Protein Info for RALBFv3_RS18810 in Ralstonia solanacearum IBSBF1503

Annotation: DUF692 domain-containing protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 292 PF05114: DUF692" amino acids 12 to 276 (265 residues), 311.9 bits, see alignment E=1.6e-97

Best Hits

Swiss-Prot: 90% identical to Y4535_RALSO: UPF0276 protein RSp1035 (RSp1035) from Ralstonia solanacearum (strain GMI1000)

KEGG orthology group: K09930, hypothetical protein (inferred from 92% identity to rsl:RPSI07_mp1066)

Predicted SEED Role

"Uncharacterized protein conserved in bacteria, NMA0228-like"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (292 amino acids)

>RALBFv3_RS18810 DUF692 domain-containing protein (Ralstonia solanacearum IBSBF1503)
MQTASTTLPASAGAGLRAPHFPALLHGQARFRWVEVHSENYLYGGPARAALLAARAHQPV
SLHGVGMGLGNADGLDVDHVRAIAALADAVEPAAVSEHLCFNRSGARVVNDLLPLPYSRE
SLDCVAANVEQAQDILRRPLLIENIATYIDCRALVDPREAIPEGAFLTALARRTGCGILL
DLNNLYVNSVNHGVTVASVLADIDPHCVHEIHLAGYSEEDGMLIDTHSRPVHASVWTLYD
AYVASHGARPTLIEWDAELPPVQVLLQEADRAQAILDRHAATPPLEARDAPA