Protein Info for RALBFv3_RS18030 in Ralstonia solanacearum IBSBF1503

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 800 PF12796: Ank_2" amino acids 478 to 569 (92 residues), 34.7 bits, see alignment E=5.5e-12 amino acids 545 to 635 (91 residues), 46.5 bits, see alignment E=1.2e-15 amino acids 632 to 702 (71 residues), 46.4 bits, see alignment E=1.2e-15 amino acids 697 to 767 (71 residues), 53.1 bits, see alignment E=9.6e-18 PF00023: Ank" amino acids 541 to 571 (31 residues), 18 bits, see alignment (E = 7.3e-07) amino acids 607 to 638 (32 residues), 20.8 bits, see alignment (E = 9.1e-08) amino acids 641 to 667 (27 residues), 22.5 bits, see alignment (E = 2.7e-08) amino acids 675 to 704 (30 residues), 18.1 bits, see alignment (E = 6.7e-07) amino acids 706 to 733 (28 residues), 18.9 bits, see alignment (E = 3.7e-07) amino acids 738 to 767 (30 residues), 17.9 bits, see alignment (E = 7.7e-07) PF13637: Ank_4" amino acids 609 to 660 (52 residues), 28.2 bits, see alignment 4.8e-10 amino acids 675 to 727 (53 residues), 27.2 bits, see alignment 9.6e-10 amino acids 708 to 759 (52 residues), 26.3 bits, see alignment 1.9e-09

Best Hits

Predicted SEED Role

"miscellaneous; unknown"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (800 amino acids)

>RALBFv3_RS18030 hypothetical protein (Ralstonia solanacearum IBSBF1503)
MLKVTPSFLRPGTAASGPAEPYHNEKAVSYQSEQDGTSMADFEASPKGKRVAGQYRAGLD
KLKDFLRVNGTADKRDGAIHALGLFGERIEAGRKGMYSTQISRMYGEGKVAFDGFCADVH
NPALPMSVRVSAVEGLAKGLLECAEGAASNLSIASQALHLSQNGLLNNARQTWEALLDQA
VREFAQQQHRGMENYTLYEIHLANGYRNHLADEYGVAGRVDSFVPPQVGQHLAACGAFVR
QRVTAGAMVRRMAEACLGEVHEHLKHYCKRALTEDEAWRFYRDYDRSLEAALEMRYGNIP
SDVLVNPHQGRGTTDAPYSVIETPTLLARTIARNLRQCELLARFKFLRMAPTPEGHSIKD
VGGDDFYVKLRNQAGAQGYRPLMIADLPKSAWLHAPIAVRKAALMNTSDPGQLKSLQPEA
VWTLIRQHIDPMGWLEDLSHPAVRRYREAEPEHDAFLIAHALLTIRKQSSKGQQMALLQA
LQQGEGALAEQLCAVVEHGARADAAGNTALHYAGEHGFDRVLAELLPKSKSRSLDARNAR
GETPLQVAARYGKARAVHALVMAGASIGAMNAEGEAALFLAARIGDAASVGVLSRYVNNL
DDQVKSGKTALMAASENGHEGVVTMLLGLGAKVDKGDNNAMTPLIAACRGGHLGCVRALI
KAGAKPDLYMSSDRSTALIQATRGRHFECAQALVNAGANVNAHTRDGTTALMAAIDAGHM
ELVRLLIPKAKLNPFDSHGKTALMRAVARGNAEGVSTLLQAGAKVDLSKAMLLALKHGHV
AVADVLDSWSKQQAGGASRR