Protein Info for RALBFv3_RS17355 in Ralstonia solanacearum IBSBF1503

Annotation: membrane protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 537 transmembrane" amino acids 42 to 65 (24 residues), see Phobius details amino acids 76 to 98 (23 residues), see Phobius details amino acids 118 to 132 (15 residues), see Phobius details

Best Hits

KEGG orthology group: None (inferred from 93% identity to rsl:RPSI07_mp1405)

Predicted SEED Role

"FIG00977507: hypothetical protein"

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Compare to protein structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (537 amino acids)

>RALBFv3_RS17355 membrane protein (Ralstonia solanacearum IBSBF1503)
MTSAATDVRPPACPADPRPAARPSRNFFARHWRGDYSLVRSYWLHTASMQFGTVALSAGI
THALAHNAPARAASSALLLIYTIGLILWVWAIVGTWRAAEREQAEKQRAGLSGVWSKVAK
LMILLSAIGTGSRIVNDLPRLAAHLRTALGEQAASPFTVTPQRDGRAVLFSGGINDGAAD
ALEQALRKTPGATTVVLRSEGGWLREGALVAEVIHRHRLHTYVERTCASACTIAFLAGDD
RAAAPGARIGFHRPRAIGADQDQVSGATDSELWRAYAAAGLPNAFVRHVQATPFDTMWFP
TARELLDNGVVTRASSGGEYATMATLLTTREALAAELRAAPLYATLERKYPAHFKSLLDS
VWPALQRNASDAEIRAQLRTQSSKLYRALLPTAPDALLLANARLTIDQAETLQHISPEAC
VGYLDGTDGPGAVAARLPGTLLTREQALFSDLVQAADPEHTPVVTRTQAMPALRLAITAL
PVQEQRVLTLPTLRHTAPAAARCHALIDFAQAILSLPEADRALALRGIYAHPAAPEA