Protein Info for RALBFv3_RS16330 in Ralstonia solanacearum IBSBF1503

Annotation: MFS transporter

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 433 transmembrane" amino acids 24 to 42 (19 residues), see Phobius details amino acids 61 to 85 (25 residues), see Phobius details amino acids 93 to 112 (20 residues), see Phobius details amino acids 118 to 139 (22 residues), see Phobius details amino acids 151 to 174 (24 residues), see Phobius details amino acids 186 to 208 (23 residues), see Phobius details amino acids 250 to 271 (22 residues), see Phobius details amino acids 283 to 304 (22 residues), see Phobius details amino acids 316 to 335 (20 residues), see Phobius details amino acids 341 to 362 (22 residues), see Phobius details amino acids 371 to 394 (24 residues), see Phobius details amino acids 403 to 424 (22 residues), see Phobius details PF07690: MFS_1" amino acids 31 to 391 (361 residues), 159.5 bits, see alignment E=5.7e-51

Best Hits

KEGG orthology group: None (inferred from 92% identity to rso:RS02128)

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (433 amino acids)

>RALBFv3_RS16330 MFS transporter (Ralstonia solanacearum IBSBF1503)
MAANAIPAQVHAGRKSASVYSIVNRRILPFLAVCYLFAYLDRINIGFAKLQMQNDLALSD
AAYGLGAGIFFFGYMLFEVPSNLLLVKIGARRTLSRILILWGLVSASMLFVTDVRTFYAL
RFLLGVFEAGFAPGMIYYLTQWYPEARMARAMAIVLGAAPVGGAIGGPVSTWIMGHFAGA
GGLAGWQWMFLAEGIPSILLGIAAYGYLVDKPADARWLTDEQKAIIAGDIARASTGQASS
FVKALADPKLYVLAAAYFCLICGVYAVSFWLPSILKSAGLTDLFQIGLYSAIPNLAMLVA
MYALGRSSDRRGERHWHSAITAILGAGLLAWAAYAASFPTALISITLASAAIFASYSVFW
AIPQAHLKGTAAAGGIAFINSIGLFGGFFSPTLIGWTKDATGSLQAGLLVMAALLVLGAV
LLATQRTPQPPIR