Protein Info for RALBFv3_RS14590 in Ralstonia solanacearum IBSBF1503

Annotation: glycoside hydrolase family 31 protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 550 600 650 700 750 803 PF13802: Gal_mutarotas_2" amino acids 29 to 218 (190 residues), 119.3 bits, see alignment E=3.8e-38 PF01055: Glyco_hydro_31_2nd" amino acids 265 to 592 (328 residues), 301.5 bits, see alignment E=1.3e-93 PF21365: Glyco_hydro_31_3rd" amino acids 601 to 687 (87 residues), 82.2 bits, see alignment E=4.7e-27

Best Hits

KEGG orthology group: K01187, alpha-glucosidase [EC: 3.2.1.20] (inferred from 93% identity to rsl:RPSI07_2310)

Predicted SEED Role

"Alpha-glucosidase (EC 3.2.1.20)" in subsystem D-Galacturonate and D-Glucuronate Utilization or Maltose and Maltodextrin Utilization (EC 3.2.1.20)

MetaCyc Pathways

KEGG Metabolic Maps

Isozymes

No predicted isozymes

Use Curated BLAST to search for 3.2.1.20

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (803 amino acids)

>RALBFv3_RS14590 glycoside hydrolase family 31 protein (Ralstonia solanacearum IBSBF1503)
MSMLHPPRFVLQAREGNHLRLSDSTGAAIELFVLEEDIVRVLVLPDGELRGPATWAIAPG
TDDTPFDGRGRRDLSGFALPPFALQVDGKTLRLETGKIRLTVTLAGGRCAWEIRQGGQWR
AVLSDRATQAYNFGFWDAQVYHYVRREPGEMYFGLGERAGELDRARQRYEMRNIDAMGYS
ARTTDPLYKHIPFYLTWQPEAAAGFGLFYDTLADCSFDMGRELDNYHGPYRYFVAQHGDL
DYYFIASPDTPLDAVRRFTWLTGRPAWMPKWGLGYSGSTMTYTDAPDAQARMGEFVERCR
EHDILCDSFHLSSGYTSIGPKRYVFNWNRDKFPDVHGFVDSYLESGIRLCANIKPCLLRD
HPAFAEADRAGLLVRDAQGEPAWVQFWDEVGAYLDFTNPQTVAWWKARVKDALLQYGVAA
TWNDNNEFEVWTPDAYARGFGRPYPVREAKVLQTQLMMRASRDAQREHAPSVRPFLVSRS
GGVGMQRYVQTWSGDNSTSWETLRYNLRMGLGLALSGVSNIGHDIGGFAGPAPSPELLVR
WVAFGVFMPRFSIHSWNDDATVNEPWMYPQATGQIASLIKLRYRLIPYLYELLWQSTQAY
EPVLRPTFADFPADRRCYEACDDMMLGASLLVAPVVEAGQTRREVYLPAGARWVSYWSGE
AFEGGQTVALPAPWEQPVMLIREGGVIALNVAEQHFDRRGDQRGFLVVPVEGAGEAAGGC
IEDDGESEAWREGEQGRWSVRAVSDAQTVTLSVTREGRMPVQADTVELFLPAGEARQVLA
PQARIVGQAVAGGWRRLTLQLPR