Protein Info for RALBFv3_RS13380 in Ralstonia solanacearum IBSBF1503

Annotation: hypothetical protein

These analyses and tools can help you predict a protein's function, but be skeptical. For enzymes, over 10% of annotations from KEGG or SEED are probably incorrect. For other types of proteins, the error rates may be much higher. MetaCyc and Swiss-Prot have low error rates, but the best hits in these databases are often quite distant, so this protein's function may not be the same. TIGRFam has low error rates. Finally, many experimentally-characterized proteins are not in any of these databases. To find relevant papers, use PaperBLAST.

Protein Families and Features

1 50 100 150 200 250 300 350 400 450 500 572 PF13175: AAA_15" amino acids 437 to 521 (85 residues), 32.9 bits, see alignment E=5.8e-12 PF13304: AAA_21" amino acids 442 to 522 (81 residues), 45.2 bits, see alignment E=1.2e-15

Best Hits

Predicted SEED Role

No annotation

Sequence Analysis Tools

PaperBLAST (search for papers about homologs of this protein)

Search CDD (the Conserved Domains Database, which includes COG and superfam)

Search structures

Predict protein localization: PSORTb (Gram-negative bacteria)

Predict transmembrane helices and signal peptides: Phobius

Check the current SEED with FIGfam search

Find homologs in fast.genomics or the ENIGMA genome browser

Find the best match in UniProt

Protein Sequence (572 amino acids)

>RALBFv3_RS13380 hypothetical protein (Ralstonia solanacearum IBSBF1503)
MGLKHISGNKKWPAINQAELVRDLTEIHGMSAEDICQSISISRKEYNLTLSTLRLIDLYK
KSDYGDQFQSEMYSIFREITRNAALKSWLVWNDKDGTSGKPLNLERLFSWLSRDNMEEED
TEEDASRIDGLQLEPVITRATHVRELARLVGDETALSSLDATRSLTQASLSSELLGRNRV
ANSISIINQELTSVFSMVRHLGDRDRLDLKRLANQISGVLDAGGGVVEPTRVHTAHLLSN
NQRHLQRMHVARYRKLIGVTFDQLARINLFAGINNSGKTSILEAVELVANLNRFKTLSDM
ICRRGKVRYEDAQADWVFGQIPEWEIEATVGDVKLEISAAKETDGPQEQAFYVGTIDTVA
QFGDDDVGSQTHFFDRYPYSTEGNTRPLLPAQFTSPYSPHAQDELIAAYEIALRCGLKDS
LINFIRSNVDPMFADVELVKDRFLVKKDQVYMDLDDFGDGIQRIFGICILFASVKDGVLL
MDEGESGIHSSLFEKFAEFIHELSVRFNVQVFLTTHSKECVDAFVKASSIPSTDVAGYAI
VAREGNPRAVRIDGQRLNELVTSIDFDLRSPA